Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 66.49 | 67.08 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 66.05 | 66.64 |
| GSMUA_Achr10P... | Banana | cytosol | 26.23 | 66.15 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 63.42 | 63.53 |
| Bra007167.1-P | Field mustard | cytosol | 55.26 | 63.0 |
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 60.0 | 62.64 |
| CDY41227 | Canola | cytosol | 59.82 | 62.4 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 59.91 | 61.26 |
| PGSC0003DMT400076344 | Potato | cytosol | 30.7 | 54.77 |
| EES13267 | Sorghum | cytosol | 51.84 | 53.68 |
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 51.05 | 52.86 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 51.05 | 52.77 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 50.09 | 52.58 |
| Zm00001d035093_P002 | Maize | plastid | 51.05 | 50.96 |
| Os01t0973300-01 | Rice | cytosol | 40.44 | 49.73 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 51.23 | 49.58 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 28.6 | 45.79 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 22.54 | 43.71 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 27.02 | 43.26 |
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 23.95 | 43.06 |
| VIT_00s0153g00080.t01 | Wine grape | cytosol | 3.42 | 26.9 |
| VIT_02s0025g00100.t01 | Wine grape | cytosol | 19.04 | 23.59 |
| VIT_04s0008g03880.t01 | Wine grape | cytosol, plastid | 14.04 | 18.96 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100251289 | wikigene:100251289 | MapMan:22.1.5.2 | InterPro:AP3B_C | InterPro:AP3_beta |
| InterPro:AP_beta | InterPro:ARM-like | InterPro:ARM-type_fold | ProteinID:CBI31666 | ProteinID:CBI31666.3 | InterPro:Clathrin/coatomer_adapt-like_N |
| UniProt:D7TLS9 | EMBL:FN595998 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030123 | InterPro:IPR011989 | EntrezGene:LOC100251289 |
| wikigene:LOC100251289 | PFAM:PF01602 | PFAM:PF14796 | PIRSF:PIRSF037096 | PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 |
| SMART:SM01355 | SUPFAM:SSF48371 | UniParc:UPI0001BE3E1E | ArrayExpress:VIT_13s0019g01530 | EnsemblPlantsGene:VIT_13s0019g01530 | EnsemblPlants:VIT_13s0019g01530.t01 |
| RefSeq:XP_002278568 | RefSeq:XP_002278568.2 | SEG:seg | : | : | : |
Description
AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:D7TLS9]
Coordinates
chr13:-:3054603..3077533
Molecular Weight (calculated)
126330.0 Da
IEP (calculated)
4.674
GRAVY (calculated)
-0.038
Length
1140 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFPQFGATAE TLSKASTLVF RIGTDAHLYD DPEDANIAPL LDSKFDSEKC EALKRLLALI AQGVDVSNFF PQVVKNVASQ SLEVKKLVYL YLLHYAEKRP
0101: NEALLSINCF QKDLGDPNPL VRAWALRAMA GIRLLVIAPI VLVAVEKCAR DPSVYVRKCA ANALPKLHDL RIEENTPALE EIVGILLNDH SPGVVGAAAA
0201: AFTSVCPNNL SLIGRNYRRL CEVLPDVEEW GQILLIEILL RFVIAKHGLV QESIMFQSCC TESSQSEKDG SDINSAFEED NGDTGRGFMS ELVNMVSRCY
0301: IEGPDEYLSR LSYINEVSSG LDRSCFMSGR GNDDVKMLLQ CTSPLLWSHN SAVVLAAAGV HWIMAPREDV KRIVKPLLFL LRSSHVSKYV VLCNIQVFAK
0401: AMPFLFAPHF EDFFISSSDS YQIKALKLEI LSSIAMDSSI SSIFQEFQDY IRDPDRRFAA DTVTAIGLCA QRLPKVANIC LEGLLALTRE EYLIGDFVCM
0501: DEETNILIQA IMSIEAILKQ DPPAHEKVIV QLVRSLDSIK VPAARAIIIW IIGEYNTIGE IIPRMLTTVL TYLARCFASE AQETKLQILN TAVKVLLCAK
0601: GKDLWTFKSV LSYVLELAKC DLSYDVRDRA HILKELMSCY LGQDLEEETD CLPQKDIPQI LAECIFRGQR KPMSPEPINF RFYLPGSLSQ IVLHAAPGYE
0701: PLPKPCSLLC NDLHQRLNVV QGIEGSGEGA TNSDSYETDD PDMLSQSANE ESTSGYSSQN SISRSSGSDE PGSESEDDDN VDPLIQFSDV GISNKKQTGV
0801: SQSGSDSMEE LMSKQTLESW LDEQPGLSDP NLSKQSQVRR SSARISIGDI GGRVKPKIYG LLDPTNGNGL RVNYSFSSEV SSMSPQLVCV ELIFENCSAE
0901: SMSKVLLVDE ESNKGLDSED QSLVATESSM PSQNDVPNLV YMEEIASIEP GQSTKCILQV CFHHHLLPVK LALWCNGKKY PVKLRPDIGY FIKPLPMDVE
1001: VFVNKESHLP GMFEYERRCT FTDHIREMNS DKGDSSLTKD KFLVICKSLA VKMLSNANLF LVSVDMPVAS NLDDASGLRL RFSSEILSNS IPCLITITIE
1101: GNCSEPLNVT IKVNCEETVF GLNLLNRIVN FLVEPSITHL
0101: NEALLSINCF QKDLGDPNPL VRAWALRAMA GIRLLVIAPI VLVAVEKCAR DPSVYVRKCA ANALPKLHDL RIEENTPALE EIVGILLNDH SPGVVGAAAA
0201: AFTSVCPNNL SLIGRNYRRL CEVLPDVEEW GQILLIEILL RFVIAKHGLV QESIMFQSCC TESSQSEKDG SDINSAFEED NGDTGRGFMS ELVNMVSRCY
0301: IEGPDEYLSR LSYINEVSSG LDRSCFMSGR GNDDVKMLLQ CTSPLLWSHN SAVVLAAAGV HWIMAPREDV KRIVKPLLFL LRSSHVSKYV VLCNIQVFAK
0401: AMPFLFAPHF EDFFISSSDS YQIKALKLEI LSSIAMDSSI SSIFQEFQDY IRDPDRRFAA DTVTAIGLCA QRLPKVANIC LEGLLALTRE EYLIGDFVCM
0501: DEETNILIQA IMSIEAILKQ DPPAHEKVIV QLVRSLDSIK VPAARAIIIW IIGEYNTIGE IIPRMLTTVL TYLARCFASE AQETKLQILN TAVKVLLCAK
0601: GKDLWTFKSV LSYVLELAKC DLSYDVRDRA HILKELMSCY LGQDLEEETD CLPQKDIPQI LAECIFRGQR KPMSPEPINF RFYLPGSLSQ IVLHAAPGYE
0701: PLPKPCSLLC NDLHQRLNVV QGIEGSGEGA TNSDSYETDD PDMLSQSANE ESTSGYSSQN SISRSSGSDE PGSESEDDDN VDPLIQFSDV GISNKKQTGV
0801: SQSGSDSMEE LMSKQTLESW LDEQPGLSDP NLSKQSQVRR SSARISIGDI GGRVKPKIYG LLDPTNGNGL RVNYSFSSEV SSMSPQLVCV ELIFENCSAE
0901: SMSKVLLVDE ESNKGLDSED QSLVATESSM PSQNDVPNLV YMEEIASIEP GQSTKCILQV CFHHHLLPVK LALWCNGKKY PVKLRPDIGY FIKPLPMDVE
1001: VFVNKESHLP GMFEYERRCT FTDHIREMNS DKGDSSLTKD KFLVICKSLA VKMLSNANLF LVSVDMPVAS NLDDASGLRL RFSSEILSNS IPCLITITIE
1101: GNCSEPLNVT IKVNCEETVF GLNLLNRIVN FLVEPSITHL
0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.