Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41227 | Canola | cytosol | 85.65 | 87.37 |
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 85.2 | 87.0 |
| Bra007167.1-P | Field mustard | cytosol | 76.59 | 85.4 |
| GSMUA_Achr10P... | Banana | cytosol | 25.2 | 62.17 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 61.17 | 60.35 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 61.26 | 59.91 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 60.54 | 59.73 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 58.3 | 57.12 |
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 48.16 | 48.77 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 47.26 | 48.53 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 47.98 | 48.5 |
| EES13267 | Sorghum | cytosol | 47.89 | 48.5 |
| PGSC0003DMT400076344 | Potato | cytosol | 26.82 | 46.79 |
| Zm00001d035093_P002 | Maize | plastid | 47.09 | 45.97 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 47.71 | 45.16 |
| Os01t0973300-01 | Rice | cytosol | 37.04 | 44.55 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 25.47 | 39.89 |
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 22.42 | 39.43 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 25.02 | 39.19 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 20.54 | 38.95 |
| AT4G23460.1 | Thale cress | cytosol | 18.39 | 22.96 |
| AT4G11380.2 | Thale cress | cytosol | 18.48 | 22.49 |
| AT5G11490.2 | Thale cress | cytosol, plastid | 13.45 | 17.65 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | EntrezGene:824714 | ProteinID:AEE79390.1 | ProteinID:AEE79391.1 | InterPro:AP3B_C |
| InterPro:AP3_beta | InterPro:AP_beta | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT3G55480 | EnsemblPlantsGene:AT3G55480 |
| RefSeq:AT3G55480 | TAIR:AT3G55480 | RefSeq:AT3G55480-TAIR-G | EnsemblPlants:AT3G55480.2 | TAIR:AT3G55480.2 | EMBL:AY059780 |
| Unigene:At.26631 | ProteinID:CAB75906.1 | InterPro:Clathrin/coatomer_adapt-like_N | UniProt:F4IWW1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0006896 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0019725 | GO:GO:0030117 | GO:GO:0030123 | GO:GO:0030659 |
| GO:GO:0031410 | GO:GO:0051453 | GO:GO:0080171 | InterPro:IPR011989 | RefSeq:NP_567022.1 | RefSeq:NP_974443.4 |
| Symbol:PAT2 | PFAM:PF01602 | PFAM:PF14796 | PIRSF:PIRSF037096 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 | SMART:SM01355 | SUPFAM:SSF48371 | UniParc:UPI0001A7B091 | SEG:seg |
Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
Coordinates
chr3:-:20566248..20571248
Molecular Weight (calculated)
122995.0 Da
IEP (calculated)
5.190
GRAVY (calculated)
-0.067
Length
1115 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.