CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73041	Soybean	cytosol, peroxisome, plastid	93.36	93.36
VIT_13s0019g01530.t01	Wine grape	cytosol	67.08	66.49
GSMUA_Achr10P...	Banana	cytosol	26.55	66.37
Bra007167.1-P	Field mustard	cytosol	55.04	62.2
Solyc06g043030.2.1	Tomato	cytosol, peroxisome, plastid	62.12	61.69
CDY41227	Canola	cytosol	59.38	61.39
CDY40224	Canola	cytosol, plasma membrane, plastid	59.03	61.08
AT3G55480.2	Thale cress	cytosol, plasma membrane, plastid	59.73	60.54
PGSC0003DMT400076344	Potato	cytosol	30.27	53.52
EES13267	Sorghum	cytosol	50.88	52.23
TraesCS3B01G599600.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	50.62	51.86
TraesCS3A01G530000.1	Wheat	cytosol	49.82	51.84
TraesCS3D01G535400.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	50.27	51.59
Zm00001d035093_P002	Maize	plastid	50.09	49.56
HORVU3Hr1G115880.4	Barley	cytosol, plastid	51.06	48.98
Os01t0973300-01	Rice	cytosol	39.38	48.0
TraesCS3B01G599800.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	22.3	42.86
GSMUA_Achr7P15120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	26.99	42.84
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	26.9	42.7
TraesCS3B01G600100.1	Wheat	cytosol, golgi, mitochondrion, nucleus	23.63	42.11
KRH77672	Soybean	endoplasmic reticulum	18.94	24.02
KRH27813	Soybean	endoplasmic reticulum, nucleus	18.85	23.72
KRH29071	Soybean	cytosol, endoplasmic reticulum	17.26	23.64
KRH24097	Soybean	endoplasmic reticulum	18.76	23.61
KRH52665	Soybean	plastid	14.69	19.64
KRH62012	Soybean	plastid	14.6	19.53

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100806345	MapMan:22.1.5.2	EMBL:ACUP02008562	InterPro:AP3B_C	InterPro:AP3_beta
InterPro:AP_beta	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N	ncoils:Coil	EnsemblPlantsGene:GLYMA_14G068200
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0030117	GO:GO:0030123	InterPro:IPR011989	UniProt:K7M5C1	EnsemblPlants:KRH15094	ProteinID:KRH15094
ProteinID:KRH15094.1	PFAM:PF01602	PFAM:PF14796	PIRSF:PIRSF037096	PANTHER:PTHR11134	PANTHER:PTHR11134:SF1
SMART:SM01355	SUPFAM:SSF48371	UniParc:UPI00029560BB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:+:5713033..5721983

Molecular Weight (calculated)

125286.0 Da

IEP (calculated)

4.916

GRAVY (calculated)

-0.052

Length

1130 amino acids

Sequence
(BLAST)

0001: MMFPQFGATA ESLSKASTAV FRIGTDAHLY DDPEDVNIAP LLDSKFDSEK CEALKRLLAL IAQGFDVSNF FPQVVKNVAS QSLEVKKLVY LYLLHYAEKR
0101: PNEALLSINY FQKDLGDTNP LVRAWALRAM AGIRLHVIAP LVIVAVQKCA RDPSVYVRKC AANALPKLHD LRMEEHASAI EEIVGLLLND HSPGVVGAAA
0201: SAFTSVCPNN FSLIGRNYRR LCEILPDVEE WGQIILIGIL LRYVIARHGL VKESIMFSLY NKDIDNLEED ESYITSKEDA GYSIDKTVSE LATMVFQCYI
0301: EGPDEYLSRS SSTNRVAPKL DVSQYTSCSN DVVKILLHCT SPLLWSNNSA VVLAAAGVHW IMASKEHIKR IVKPLLFVLR SSSASRYVVL CNIQVFAKAI
0401: PSLFAPHYQD FFICSSDSYQ IKALKLDVLS SIATDSSISF IYKEFQDYIR DPNRRFAADT VAALGLCAQR LPKMATSCVE GLLTLVRQEF FCGEIRSLDG
0501: EEGVLTQAII SIKSIIKLEP SSYEKVIIQL VCSLDKIKVP AARAMIIWIL GEYCSLGDII PRMLSTVLKY LARCFTSEAL EAKLQFLNTT AKVLLCIKGE
0601: DILTVRKVWS YVIELAERDL NYDIRDRSRF LKKLLSSNLE SQHGEEENSE SQKRDQSYIL AECIFGGQTK AMTVPSEPID YRFYLPGSLS QLVFHAAPGY
0701: EPLPKPCSLP YTDLDQYDGA AKSDSDEEDD TGTSGSLDEG SASDYSSEQS ITASGEASGS DESVSGNEGE DNADPLIQIS DTGNVCEYQN SGAPSGTAGF
0801: RDLMSTKSLE SWLDEPARSS KGSEIEQSQV RRSSARITIG NIGNRVKPKC YTLLDPVNGN GLKVNYSFSS ETSSISSHLV CLEVLFENCS LEPMFDIVLI
0901: EEDYSKSSDS TDRTSSPTEN TLKFHVNKPA LVSMEEIPSL EPGETANRTL LVRFHHHLLP LHLALFCNDK KFPVKLKPDI GYFIKPLPLS IEDFRDKESR
1001: LPGMFEYVRS CTFTDHILEL NKRSNSLTED KFLVICETLA LQMLSNANLS LVSVDMPVAA NLDDASGLCL RFSSEILSNS MPCLITVTVE GKCSDPLIVS
1101: VKVNCEETVF GLNFLNRVVN FLVEPSVTHL

Best Arabidopsis Sequence Match ( AT3G55480.2 )
(BLAST)

0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT

Arabidopsis Description

PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.