Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076344 | Potato | cytosol | 46.66 | 83.1 |
| GSMUA_Achr10P... | Banana | cytosol | 25.66 | 64.6 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 63.53 | 63.42 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 62.13 | 62.57 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 61.69 | 62.12 |
| Bra007167.1-P | Field mustard | cytosol | 53.25 | 60.6 |
| CDY41227 | Canola | cytosol | 57.29 | 59.65 |
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 57.12 | 59.52 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 57.12 | 58.3 |
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 50.88 | 52.59 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 50.97 | 52.58 |
| EES13267 | Sorghum | cytosol | 50.79 | 52.5 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 50.0 | 52.39 |
| Zm00001d035093_P002 | Maize | plastid | 50.18 | 50.0 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 50.79 | 49.07 |
| Os01t0973300-01 | Rice | cytosol | 38.66 | 47.46 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 22.58 | 43.71 |
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 24.25 | 43.53 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 27.15 | 43.4 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 26.27 | 41.99 |
| Solyc08g081320.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 19.16 | 24.33 |
| Solyc08g068210.2.1 | Tomato | plastid | 14.15 | 19.17 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | InterPro:AP3B_C | InterPro:AP3_beta | InterPro:AP_beta | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030123 | InterPro:IPR011989 |
| UniProt:K4C557 | PFAM:PF01602 | PFAM:PF14796 | PIRSF:PIRSF037096 | PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 |
| SMART:SM01355 | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc06g043030.2 | EnsemblPlants:Solyc06g043030.2.1 | UniParc:UPI0002766353 | SEG:seg |
Description
AP3-complex subunit beta-A [Source:Projected from Arabidopsis thaliana (AT3G55480) UniProtKB/Swiss-Prot;Acc:Q9M2T1]
Coordinates
chr6:-:29876575..29886821
Molecular Weight (calculated)
126044.0 Da
IEP (calculated)
5.366
GRAVY (calculated)
-0.046
Length
1138 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFTQFGATAD SLSKASSLMF RIGTDAHLYD DPDDVNIAPL LDSKFDSEKC EALKRLLALI AQGCNISNFF PQVVKNVASQ SMEVKKLVYL YLLHYAEKRP
0101: NEALLSINCF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL VLVAVGRCAR DPSVYVRKCA ANALPKLHDL RLEENISTIE ELVGILLNDN APGVVGAAAA
0201: AFASICPNNF SLIAKNYRRL CETLPDVEEW GQIVLIGILI RYSIARHGLV KESLMVASHS PENSDSEKEG SETYFGIKER TNDIGRVVCE SEIAEMVSRS
0301: YLEGPDKYLS RPCSERAFSF SDLSDFTSAK SNDDVKILLQ CTLPLLWSQN SAVVLAAAGV HWIMAPKEEL KRIVKPLLFL LRSSDASKYV VLCNIQVFAK
0401: AMPTLFVSHF EDFFVSSTDP YPVKALKLDI LSLIATDSSI SPIFNEFQDY IKDPDRRFAA DAVAAIGLCA QRLPNIASIC LEGLLVLTSS EISDVDIASM
0501: DEEAIILIQA INSIKTIIKH EHSSHDKVIV HLASKLDSIR VPSARAMIIW MLGEYNSMGH IIPKVLPTVL KYLAWTFSSE ALETKLQILN ALVKVLLHAE
0601: GEALSTFKTL LNYVLELAKC DSNYDIRDRG RLLQKLLSHY KGTHELEEST PDSTLPVLVG HLFGRETKPV PSEPLAYRFY LPGSLSQMVL HAAPGYEPLP
0701: QPLSLICNDT THESNMVIGM KQPRNRATQS ESYETDDANS VSGSLNEEST SGYNSQDSKT GSSGTHGSHR SGSVSDDDEH AGPLIHLSDN GNAHGNQLGP
0801: RFYQNFDSND LGELMSIKSL ESWLDDNPGS THNPVELNNV CQSLARISIG DISSRVKPKS YTLLDPANGN GLSVEYIFSS EMSSISPLLV CIQVTFTNNS
0901: VEAMSNLQLI EEVSSMRVES SDQVLTSDES SKMSVNDVPT LVPMEEIAKL ERGQVMQRIL QVRFHHHLLP LKLLLWCNGK KYPVKLRPDI GYFVKPLPME
1001: INMFSIKESQ LPGMFEYIRR CTFIDHIEEL NKLESPLAKD NFLVICETLA LKVLSNSNLF LLSVDMPVGT NLDDASGVRL RFSGEILSNS IPCLITITLE
1101: GRCSEPLDTK VKVNCEETVF GLNFLNRVVN YLTEPARL
0101: NEALLSINCF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL VLVAVGRCAR DPSVYVRKCA ANALPKLHDL RLEENISTIE ELVGILLNDN APGVVGAAAA
0201: AFASICPNNF SLIAKNYRRL CETLPDVEEW GQIVLIGILI RYSIARHGLV KESLMVASHS PENSDSEKEG SETYFGIKER TNDIGRVVCE SEIAEMVSRS
0301: YLEGPDKYLS RPCSERAFSF SDLSDFTSAK SNDDVKILLQ CTLPLLWSQN SAVVLAAAGV HWIMAPKEEL KRIVKPLLFL LRSSDASKYV VLCNIQVFAK
0401: AMPTLFVSHF EDFFVSSTDP YPVKALKLDI LSLIATDSSI SPIFNEFQDY IKDPDRRFAA DAVAAIGLCA QRLPNIASIC LEGLLVLTSS EISDVDIASM
0501: DEEAIILIQA INSIKTIIKH EHSSHDKVIV HLASKLDSIR VPSARAMIIW MLGEYNSMGH IIPKVLPTVL KYLAWTFSSE ALETKLQILN ALVKVLLHAE
0601: GEALSTFKTL LNYVLELAKC DSNYDIRDRG RLLQKLLSHY KGTHELEEST PDSTLPVLVG HLFGRETKPV PSEPLAYRFY LPGSLSQMVL HAAPGYEPLP
0701: QPLSLICNDT THESNMVIGM KQPRNRATQS ESYETDDANS VSGSLNEEST SGYNSQDSKT GSSGTHGSHR SGSVSDDDEH AGPLIHLSDN GNAHGNQLGP
0801: RFYQNFDSND LGELMSIKSL ESWLDDNPGS THNPVELNNV CQSLARISIG DISSRVKPKS YTLLDPANGN GLSVEYIFSS EMSSISPLLV CIQVTFTNNS
0901: VEAMSNLQLI EEVSSMRVES SDQVLTSDES SKMSVNDVPT LVPMEEIAKL ERGQVMQRIL QVRFHHHLLP LKLLLWCNGK KYPVKLRPDI GYFVKPLPME
1001: INMFSIKESQ LPGMFEYIRR CTFIDHIEEL NKLESPLAKD NFLVICETLA LKVLSNSNLF LLSVDMPVGT NLDDASGVRL RFSGEILSNS IPCLITITLE
1101: GRCSEPLDTK VKVNCEETVF GLNFLNRVVN YLTEPARL
0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.