Factsheet for GSMUA_Achr10P22640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P15120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	48.23	30.62
Bra007167.1-P	Field mustard	cytosol	63.5	28.7
KRH15094	Soybean	cytosol, peroxisome, plastid	66.37	26.55
KRH73041	Soybean	cytosol, peroxisome, plastid	66.37	26.55
VIT_13s0019g01530.t01	Wine grape	cytosol	66.15	26.23
CDY41227	Canola	cytosol	63.05	26.07
CDY40224	Canola	cytosol, plasma membrane, plastid	62.83	26.01
EES13267	Sorghum	cytosol	63.27	25.98
TraesCS3D01G535400.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	63.05	25.89
TraesCS3B01G599600.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	63.05	25.84
Solyc06g043030.2.1	Tomato	cytosol, peroxisome, plastid	64.6	25.66
TraesCS3A01G530000.1	Wheat	cytosol	60.62	25.23
AT3G55480.2	Thale cress	cytosol, plasma membrane, plastid	62.17	25.2
Zm00001d035093_P002	Maize	plastid	62.61	24.78
HORVU3Hr1G115880.4	Barley	cytosol, plastid	63.05	24.19
Os01t0973300-01	Rice	cytosol	32.74	15.97
GSMUA_Achr1P13670_001	Banana	cytosol	22.12	11.88
GSMUA_AchrUn_...	Banana	cytosol	23.45	11.75
GSMUA_Achr1P24200_001	Banana	cytosol	23.45	11.75
TraesCS3B01G599800.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	1.99	1.53
TraesCS3B01G600100.1	Wheat	cytosol, golgi, mitochondrion, nucleus	1.99	1.42
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	1.77	1.12
PGSC0003DMT400076344	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.2	InterPro:AP3_beta	InterPro:AP_beta	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0030117	GO:GO:0030123	EnsemblPlantsGene:GSMUA_Achr10G22640_001	EnsemblPlants:GSMUA_Achr10P22640_001	EnsemblPlants:GSMUA_Achr10T22640_001
InterPro:IPR011989	UniProt:M0RKI9	PFAM:PF01602	PANTHER:PTHR11134	PANTHER:PTHR11134:SF1	SUPFAM:SSF48371
UniParc:UPI0002968230	SEG:seg	:	:	:	:

Description

adaptin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G22640_001]

Coordinates

chr10:+:27756160..27760252

Molecular Weight (calculated)

50070.2 Da

IEP (calculated)

5.957

GRAVY (calculated)

0.122

Length

452 amino acids

Sequence
(BLAST)

001: MFAQFGATAE SLSKASSLVL RIGTDAHLYD DPDDVSIGPL LDSRYDSEKV DALKRLLALI AQGADVSHFF PQVVKNVASQ SLEVKKLVYL YLLHYAEKRQ
101: NEALLSINCF QKDLSDTNPL VRAWALRAMA GIRLHAVAPL VLAAISKCAR DPSAYVRKGA AYALPKLYDL HHDEDSTALE ELVDILLSDH SPGVVGAAAA
201: AFKSVCPTSL YLIAKSFRRL CETLPDIEEW GQIVLIEILL RYVIARHGLV KESIMFSSNS ASHSQADENF ATSGDMLDHH HYHHSVVDMA CDSNMVTVMY
301: KSYIEGQKES FTQAGCAKGD DDKLDLPPLT SSTNDDVDIL LRCTSPLLWS HNSAVVLAAA GVHWIIAPRK EMERIIKPIL FILRSSQASK YILCNILVFA
401: KADPSLFSLN YEDFFVFSSD SYQIKVLKLE ILSTIATKSS LPIILEEFQV IF

Best Arabidopsis Sequence Match ( AT3G55480.2 )
(BLAST)

0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT

Arabidopsis Description

PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.