Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41227 | Canola | cytosol | 95.15 | 95.06 |
| Bra007167.1-P | Field mustard | cytosol | 84.8 | 92.6 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 87.0 | 85.2 |
| GSMUA_Achr10P... | Banana | cytosol | 26.01 | 62.83 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 62.64 | 60.0 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 61.45 | 59.38 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 61.08 | 59.03 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 59.52 | 57.12 |
| EES13267 | Sorghum | cytosol | 50.0 | 49.59 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 49.82 | 49.32 |
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 49.73 | 49.32 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 48.99 | 49.26 |
| PGSC0003DMT400076344 | Potato | cytosol | 27.56 | 47.1 |
| Zm00001d035093_P002 | Maize | plastid | 49.08 | 46.94 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 49.63 | 46.01 |
| Os01t0973300-01 | Rice | cytosol | 38.46 | 45.31 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 26.1 | 40.03 |
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 23.17 | 39.91 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 26.01 | 39.89 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 21.15 | 39.29 |
| CDX70642 | Canola | cytosol | 4.58 | 23.81 |
| CDX94190 | Canola | cytosol | 19.05 | 23.11 |
| CDY13257 | Canola | cytosol | 18.96 | 23.03 |
| CDX70396 | Canola | plastid | 14.1 | 18.33 |
| CDX78425 | Canola | plastid | 14.01 | 18.21 |
| CDX97117 | Canola | plastid | 13.92 | 18.05 |
| CDX86788 | Canola | cytosol | 19.05 | 18.01 |
| CDY71479 | Canola | cytosol | 6.32 | 16.01 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | GO:A0A078HSE8 | UniProt:A0A078HSE8 | InterPro:AP3B_C | InterPro:AP3_beta |
| InterPro:AP_beta | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDY40224 | ProteinID:CDY40224 | ProteinID:CDY40224.1 |
| InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030123 | EnsemblPlantsGene:GSBRNA2T00069374001 | InterPro:IPR011989 | PFAM:PF01602 |
| PFAM:PF14796 | PIRSF:PIRSF037096 | PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 | SMART:SM01355 | SUPFAM:SSF48371 |
| UniParc:UPI0004EDE1F8 | SEG:seg | : | : | : | : |
Description
BnaA09g35060DAP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078HSE8]
Coordinates
chrLK032466:-:165114..169814
Molecular Weight (calculated)
120676.0 Da
IEP (calculated)
5.031
GRAVY (calculated)
-0.040
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFNQFGSTAE TLSKASAAVL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLHYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALSAVGKCAR DPAVYVRKCA ANALPKLHDL RLEEHAPAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF SLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSLHG LESNGFYEKD GLVGDKKDGD KSDSFDANLV SLVSKCYIEA
0301: SFDSKETTSV GDNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSTASKY VVLCNILVFA KAVPSLFAPH FEDFFICSSD
0401: AYQVKAHKLE MLSLIATTSS ISSILREFED YIKDPDRRFA ADTVAAIGLC AKRLPEIPTA CLNGLLALVR QESFAGDLEL VDGEAGVLVQ AVMSIQTIIE
0501: RDPLSHEKVI VQLFRCLDSV KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTAAKVLISA EVEDFQMLKK IVLYVLELGE
0601: CDLNYDVRDR TRFLKKMLSY KLACHEPTED SVASQENIAE HVVEYVFGRK LKPFSPLNLH NRFYLPGSLS QIVLHAAPGY EPLPKPCSFV VEEHDQLSDS
0701: GRQREAMSGL NGSQESSETV DEDGSSEYDS ESYNGSDFSS DGDERNDAND AADPLIQFSD IAVSTDQEEL RSKRALDLWL DEESSTSNQT PSALDRNQSS
0801: YAKISIGDIG SRVKPKSYTL LDPGNGNGVK IDYTFLSEVS TVSPLHVCVE VLFQNSSTEP IVEVSLEDEE AMNVSDSAEQ TLVGKANASY NNVPTLIPME
0901: ELSCLEPGQS AKRLIQVRFH HHLLPMRLSL HYNGKKVPVK LRPDLGYLVK PFSITIEEFL STESRLPGMF EYTRRCTFTD HIKDTRMENG KDKFLTICES
1001: ITLKVLSNSN LHLVSVDLPV ASTLEDATGL RLRFSSKILS SEIPLLITIT VQGKCTEDLN LTVKINCEET VFGLNLLNRI ANFMVETSSS AI
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALSAVGKCAR DPAVYVRKCA ANALPKLHDL RLEEHAPAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF SLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSLHG LESNGFYEKD GLVGDKKDGD KSDSFDANLV SLVSKCYIEA
0301: SFDSKETTSV GDNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSTASKY VVLCNILVFA KAVPSLFAPH FEDFFICSSD
0401: AYQVKAHKLE MLSLIATTSS ISSILREFED YIKDPDRRFA ADTVAAIGLC AKRLPEIPTA CLNGLLALVR QESFAGDLEL VDGEAGVLVQ AVMSIQTIIE
0501: RDPLSHEKVI VQLFRCLDSV KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTAAKVLISA EVEDFQMLKK IVLYVLELGE
0601: CDLNYDVRDR TRFLKKMLSY KLACHEPTED SVASQENIAE HVVEYVFGRK LKPFSPLNLH NRFYLPGSLS QIVLHAAPGY EPLPKPCSFV VEEHDQLSDS
0701: GRQREAMSGL NGSQESSETV DEDGSSEYDS ESYNGSDFSS DGDERNDAND AADPLIQFSD IAVSTDQEEL RSKRALDLWL DEESSTSNQT PSALDRNQSS
0801: YAKISIGDIG SRVKPKSYTL LDPGNGNGVK IDYTFLSEVS TVSPLHVCVE VLFQNSSTEP IVEVSLEDEE AMNVSDSAEQ TLVGKANASY NNVPTLIPME
0901: ELSCLEPGQS AKRLIQVRFH HHLLPMRLSL HYNGKKVPVK LRPDLGYLVK PFSITIEEFL STESRLPGMF EYTRRCTFTD HIKDTRMENG KDKFLTICES
1001: ITLKVLSNSN LHLVSVDLPV ASTLEDATGL RLRFSSKILS SEIPLLITIT VQGKCTEDLN LTVKINCEET VFGLNLLNRI ANFMVETSSS AI
0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.