Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 95.74 | 95.91 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 94.02 | 95.49 |
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 52.22 | 90.85 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 96.19 | 90.07 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 47.23 | 88.61 |
| EES13267 | Sorghum | cytosol | 75.97 | 76.11 |
| Os01t0973300-01 | Rice | cytosol | 62.65 | 74.54 |
| Zm00001d035093_P002 | Maize | plastid | 74.43 | 71.89 |
| GSMUA_Achr10P... | Banana | cytosol | 25.84 | 63.05 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 52.77 | 51.05 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 52.58 | 50.97 |
| Bra007167.1-P | Field mustard | cytosol | 45.97 | 50.7 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 51.86 | 50.62 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 51.86 | 50.62 |
| CDY41227 | Canola | cytosol | 49.41 | 49.86 |
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 49.32 | 49.82 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 48.5 | 47.98 |
| PGSC0003DMT400076344 | Potato | cytosol | 25.84 | 44.6 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 28.2 | 43.68 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 27.2 | 42.13 |
| TraesCS4B01G165000.1 | Wheat | cytosol, golgi | 19.22 | 23.61 |
| TraesCS3B01G255800.2 | Wheat | plastid | 14.6 | 19.14 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | InterPro:AP3B_C | InterPro:AP3_beta | InterPro:AP_beta | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030123 | InterPro:IPR011989 | PFAM:PF01602 | PIRSF:PIRSF037096 |
| PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 | SMART:SM01355 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS3B01G599600 | EnsemblPlants:TraesCS3B01G599600.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:820498086..820505963
Molecular Weight (calculated)
121047.0 Da
IEP (calculated)
4.909
GRAVY (calculated)
0.062
Length
1103 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFGMRASGAA ASWVVGRMGT DAHLYDDPED AAIPALLDSR FDADKVDALK RLLALIAQGV DVAHLFPQVV KNVAAQSLEV KKLVYLYLLH YAETRQNEAL
0101: LSINIFQKDL SDINPLVRAW ALRTMAGIRL HVVAPLVLVA VKKCARDPSP YVRKCAAYAL CKLYDLLPEE NTTLEEIVDV LLGDSSFGVV GAAAVAFKSV
0201: CPNCLALIAK HFQRLCETLP DIEEWYQITL IEILLRYVIA KHGLVKDSVM FALELSLESQ AGRDSVPVSN ISSTQTETIV KGGSGTMPNI MLFRHYIEEY
0301: SGAFDRDDDK FSFPSVTSST NDDVVILLKC TSPLLWSQNS AVILAAASVH WIMAPAEEVK RIVGPILFTL RSSPDATYVM LGNILVFAKT APLLFASYYE
0401: DFFICASDPY QTRALKLEIL TTIATESSIP AILEEFQDYI KDPNRRFVAD TVAAIALCAL KLPSITASCL EGLLALVLYE LSITNSVHLN EEDAVLVQAI
0501: LSIKEVAKID AASHEKVIIR LVRCLDTIKE PAARSLIIWI FGEYSSIGNL IPKIAPVVLK YLAWSFAAEV LETKLQILNA SAKVIIHSAE EQLEEFKRIV
0601: AYVIQLAACD MNYDVRDRAR FLSGLLPCCA TENDPSCRSQ NVDVIKELAD HIFGGKIPPA SNSDSNYRIY LPGSLSQVVL HAAPGYAPLP KPQSMILIHK
0701: TVEPTRGVAD SSEGTNSDAE SGSSRGESGS VYDSESEAGS DSNDDGHNLH RQEENQEAPL IHMYDGNVDQ ACAGRAVDEN LASLISTDLT ELMSKSALES
0801: WLDEAPAAPL VQDSVQTSCA RVSFTTRSFE RKPKLHRLLD PSDSDGLSVL YAFSSEVSPK SRLLVCVDLF VENVTTEQLA DITIKSEEAS GSKGGMDQTS
0901: EGSASIPTLV PVEEIQSLAP EQTAKMLLQV HFHHHLLPLK LSVLCNGKRH PAKLHPDIAY FVRPLPMDLN AFLCKENQLR GMFEYARRCT FKDHLQKHKQ
1001: TEESTDHNTD NNLLVAQTLA SKVLSNANVH LVSMDMPVTF SIDDASGLCW RFSSEILSTS YPCLITIVAD GHTSEPLDLT VKVNSEDTAF GLNLLNRVVA
1101: IIE
0101: LSINIFQKDL SDINPLVRAW ALRTMAGIRL HVVAPLVLVA VKKCARDPSP YVRKCAAYAL CKLYDLLPEE NTTLEEIVDV LLGDSSFGVV GAAAVAFKSV
0201: CPNCLALIAK HFQRLCETLP DIEEWYQITL IEILLRYVIA KHGLVKDSVM FALELSLESQ AGRDSVPVSN ISSTQTETIV KGGSGTMPNI MLFRHYIEEY
0301: SGAFDRDDDK FSFPSVTSST NDDVVILLKC TSPLLWSQNS AVILAAASVH WIMAPAEEVK RIVGPILFTL RSSPDATYVM LGNILVFAKT APLLFASYYE
0401: DFFICASDPY QTRALKLEIL TTIATESSIP AILEEFQDYI KDPNRRFVAD TVAAIALCAL KLPSITASCL EGLLALVLYE LSITNSVHLN EEDAVLVQAI
0501: LSIKEVAKID AASHEKVIIR LVRCLDTIKE PAARSLIIWI FGEYSSIGNL IPKIAPVVLK YLAWSFAAEV LETKLQILNA SAKVIIHSAE EQLEEFKRIV
0601: AYVIQLAACD MNYDVRDRAR FLSGLLPCCA TENDPSCRSQ NVDVIKELAD HIFGGKIPPA SNSDSNYRIY LPGSLSQVVL HAAPGYAPLP KPQSMILIHK
0701: TVEPTRGVAD SSEGTNSDAE SGSSRGESGS VYDSESEAGS DSNDDGHNLH RQEENQEAPL IHMYDGNVDQ ACAGRAVDEN LASLISTDLT ELMSKSALES
0801: WLDEAPAAPL VQDSVQTSCA RVSFTTRSFE RKPKLHRLLD PSDSDGLSVL YAFSSEVSPK SRLLVCVDLF VENVTTEQLA DITIKSEEAS GSKGGMDQTS
0901: EGSASIPTLV PVEEIQSLAP EQTAKMLLQV HFHHHLLPLK LSVLCNGKRH PAKLHPDIAY FVRPLPMDLN AFLCKENQLR GMFEYARRCT FKDHLQKHKQ
1001: TEESTDHNTD NNLLVAQTLA SKVLSNANVH LVSMDMPVTF SIDDASGLCW RFSSEILSTS YPCLITIVAD GHTSEPLDLT VKVNSEDTAF GLNLLNRVVA
1101: IIE
0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.