CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002538_P001	Maize	cytosol	91.08	91.08
Zm00001d010979_P001	Maize	nucleus	17.83	79.57
Os04t0584800-01	Rice	cytosol	75.9	75.36
TraesCS2A01G455900.1	Wheat	cytosol	75.42	74.52
Zm00001d043645_P001	Maize	cytosol	19.04	73.83
TraesCS2D01G456200.1	Wheat	cytosol	74.7	73.81
TraesCS2B01G477900.1	Wheat	cytosol	73.25	72.21
Zm00001d007683_P001	Maize	extracellular	14.22	71.95
GSMUA_Achr4P29710_001	Banana	cytosol	58.31	60.35
VIT_07s0031g02260.t01	Wine grape	cytosol	49.88	51.36
CDX81426	Canola	nucleus	45.54	49.74
AT5G65960.1	Thale cress	cytosol	46.75	49.36
KRH07810	Soybean	cytosol	46.51	48.98
Bra037194.1-P	Field mustard	nucleus	46.02	48.85
CDY18578	Canola	cytosol	45.78	48.84
KRH39402	Soybean	cytosol	46.02	48.35
PGSC0003DMT400048040	Potato	cytosol	45.54	46.67
Zm00001d049633_P002	Maize	mitochondrion	23.86	46.05
Solyc03g032050.2.1	Tomato	cytosol	44.82	45.93
Zm00001d008959_P001	Maize	plastid	29.16	43.53
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	29.64	40.07

Protein Annotations

MapMan:35.2	EntrezGene:8057699	InterPro:Alpha/Gamma-adaptin-bd_p34	UniProt:C5YEK9	EnsemblPlants:EES11323	ProteinID:EES11323
ProteinID:EES11323.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PFAM:PF10199	PANTHER:PTHR14659
EnsemblPlantsGene:SORBI_3006G192700	SUPFAM:SSF52540	unigene:Sbi.18644	InterPro:Small_GTPase	UniParc:UPI0001A86DBB	RefSeq:XP_002446995.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:54644370..54647550

Molecular Weight (calculated)

45939.0 Da

IEP (calculated)

4.074

GRAVY (calculated)

-0.451

Length

415 amino acids

Sequence
(BLAST)

001: MEGSLEARPG VLLVGAPGVG KRTILSRLLA AEIPDVHDLS SGVLCQGWTI QTKYYSADLS IWTANLGEEF SLGSLPHLDR LAALVMVFDM NDESTLLTLQ
101: SWAANVDIQR FEVLLCIGNK ADLVPGHSAH IEYRRCMQKL GESSSDLHPD YFDFGINESE GCSLLSEEEP CIEIRNSTAQ WCIEQNIEYI EACASNADFD
201: KCLSVDGDSQ GLERLLGALS AHMWPGMILK SGNRITAPSL VEKEESTDDE SNYDFEYEVL SHGSDDQWEF VGETSTSRSF ERSSEVDGTQ DHTHQVVKAG
301: TDSSASNSLP SNMPTETAEE NTVTRSNKTD NSDHVDTTTA YSTEDNQSDL PEANHLFEDE HYGLDDLEKI MSEIGNVRSN LRLMPDFQRR EMAAKLAMKM
401: AAMFGGDEEE AFEDI

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.