CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07810	Soybean	cytosol	91.9	92.13
Zm00001d007683_P001	Maize	extracellular	13.92	67.07
AT5G65960.1	Thale cress	cytosol	58.23	58.52
CDX81426	Canola	nucleus	55.19	57.37
VIT_07s0031g02260.t01	Wine grape	cytosol	58.23	57.07
Zm00001d043645_P001	Maize	cytosol	15.44	57.01
CDY18578	Canola	cytosol	55.7	56.56
Bra037194.1-P	Field mustard	nucleus	55.7	56.27
Solyc03g032050.2.1	Tomato	cytosol	54.68	53.33
PGSC0003DMT400048040	Potato	cytosol	54.18	52.84
GSMUA_Achr4P29710_001	Banana	cytosol	51.9	51.12
EES11323	Sorghum	cytosol	48.35	46.02
TraesCS2A01G455900.1	Wheat	cytosol	47.85	45.0
Zm00001d002538_P001	Maize	cytosol	47.09	44.82
TraesCS2D01G456200.1	Wheat	cytosol	47.59	44.76
Os04t0584800-01	Rice	cytosol	47.34	44.74
TraesCS2B01G477900.1	Wheat	cytosol	46.84	43.94
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	28.1	36.16
Zm00001d010979_P001	Maize	nucleus	7.59	32.26
Zm00001d008959_P001	Maize	plastid	18.73	26.62
Zm00001d049633_P002	Maize	mitochondrion	13.67	25.12

Protein Annotations

EntrezGene:100813911	Gene3D:3.40.50.300	MapMan:35.2	EMBL:ACUP02005935	InterPro:Alpha/Gamma-adaptin-bd_p34	ncoils:Coil
EnsemblPlantsGene:GLYMA_09G196600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	UniProt:I1L4P2	EnsemblPlants:KRH39402	ProteinID:KRH39402	ProteinID:KRH39402.1
InterPro:P-loop_NTPase	PFAM:PF00071	PFAM:PF10199	PANTHER:PTHR14659	SUPFAM:SSF52540	InterPro:Small_GTPase
UniParc:UPI0002339185	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:42116493..42119257

Molecular Weight (calculated)

43795.7 Da

IEP (calculated)

4.120

GRAVY (calculated)

-0.509

Length

395 amino acids

Sequence
(BLAST)

001: MESQTDLLNR PGIFLIGSSN VGKRTLLSRL TSVDVEGAAF DSASQVNVHG WTINNKYYTA DVSIWMAHLN DDFSAANVPV FRRMTALVMV FDMNEPSSLA
101: ALREWVSHTD IQNFEILLCI GNKVDLVTGH PAHAEYRRRL LKLEDSAADL YSEEYGISEL EGTSLLGDEE PSWDIRRSCL EWCTDHNIEF IEACGSNADF
201: DKCLSIDGDL QGVERLYGAL SAHMWPGMVL KSGDRINQPS FPEKEELSSE ESDYEQEYEV LSAGSADWDE SEQGWVSASS LGAGGSAPQN NPGTDGQHED
301: EIKSDKESHP TTSSPTIQDE SDKDVVHNIM DSKGDGKENE AKCLELEDLE QLMSEIGNMR AGLRLMPDFQ RRDMAAKLAM KMASIFGGES DEEEI

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.