Factsheet for Bra037194.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18578	Canola	cytosol	95.14	95.63
AT5G65960.1	Thale cress	cytosol	71.61	71.25
Zm00001d007683_P001	Maize	extracellular	12.79	60.98
Zm00001d043645_P001	Maize	cytosol	15.86	57.94
KRH39402	Soybean	cytosol	56.27	55.7
KRH07810	Soybean	cytosol	55.24	54.82
VIT_07s0031g02260.t01	Wine grape	cytosol	56.01	54.34
PGSC0003DMT400048040	Potato	cytosol	53.71	51.85
Solyc03g032050.2.1	Tomato	cytosol	53.71	51.85
GSMUA_Achr4P29710_001	Banana	cytosol	48.59	47.38
EES11323	Sorghum	cytosol	48.85	46.02
Os04t0584800-01	Rice	cytosol	47.83	44.74
Zm00001d002538_P001	Maize	cytosol	46.29	43.61
TraesCS2A01G455900.1	Wheat	cytosol	45.27	42.14
TraesCS2B01G477900.1	Wheat	cytosol	45.01	41.81
TraesCS2D01G456200.1	Wheat	cytosol	44.5	41.43
Zm00001d010979_P001	Maize	nucleus	8.7	36.56
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	27.62	35.18
Zm00001d049633_P002	Maize	mitochondrion	15.6	28.37
Zm00001d008959_P001	Maize	plastid	19.69	27.7

Protein Annotations

EnsemblPlants:Bra037194.1	EnsemblPlants:Bra037194.1-P	EnsemblPlantsGene:Bra037194	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:Alpha/Gamma-adaptin-bd_p34
InterPro:P-loop_NTPase	InterPro:Small_GTPase	PANTHER:PTHR14659	PFAM:PF00071	PFAM:PF10199	SEG:seg
SUPFAM:SSF52540	UniParc:UPI0002541C2D	UniProt:M4F7Y3	MapMan:35.2	:	:

Description

AT5G65960 (E=9e-126) | unknown protein

Coordinates

chrA09:+:4053358..4055256

Molecular Weight (calculated)

43247.7 Da

IEP (calculated)

3.986

GRAVY (calculated)

-0.504

Length

391 amino acids

Sequence
(BLAST)

001: MEEEKTLEME EGRKRPGVLV VGSSGVGKRT LLSRLISVDF EDSSSSQTEV HDWTINTKYY SADVSVWICD DYSLPQPQAH SHPLVALVMV FDLNQMSTLV
101: ALQDWASHAD ISSFDILLCI GNKVDLVPHH PAHAEYRRRL SKASTNLYSD IDDEFGISQS EGSSLLGSDD TSSLDIRGTC LEWCRDNNIE FIEACASNPD
201: FDKCLSVDGD SQGVDRLFGA LSAHMWPGMI LKSGDKINEP VLPPHGEELS EEESEYELEY EVLSSGSADP WENIDERWVS ADAGGSTSRE VEVNPKKVVD
301: DDVIELGSSG TQSETVVTTT DEKPLGDTED NNKVYELEDV EQLMSEIGNI RDNLRLMPDF QRREIAANLA MKMASMFGGG GDDSDNEEES E

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.