Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007683_P001 | Maize | extracellular | 63.55 | 82.93 |
| Zm00001d010979_P001 | Maize | nucleus | 28.97 | 33.33 |
| Zm00001d049633_P002 | Maize | mitochondrion | 53.27 | 26.51 |
| Zm00001d008959_P001 | Maize | plastid | 58.88 | 22.66 |
| Zm00001d002538_P001 | Maize | cytosol | 75.7 | 19.52 |
| EES11323 | Sorghum | cytosol | 73.83 | 19.04 |
| TraesCS2A01G455900.1 | Wheat | cytosol | 69.16 | 17.62 |
| Os04t0584800-01 | Rice | cytosol | 68.22 | 17.46 |
| TraesCS2B01G477900.1 | Wheat | cytosol | 68.22 | 17.34 |
| GSMUA_Achr4P29710_001 | Banana | cytosol | 63.55 | 16.96 |
| TraesCS2D01G456200.1 | Wheat | cytosol | 65.42 | 16.67 |
| CDX81426 | Canola | nucleus | 57.94 | 16.32 |
| PGSC0003DMT400048040 | Potato | cytosol | 60.75 | 16.05 |
| AT5G65960.1 | Thale cress | cytosol | 58.88 | 16.03 |
| KRH07810 | Soybean | cytosol | 58.88 | 15.99 |
| Bra037194.1-P | Field mustard | nucleus | 57.94 | 15.86 |
| Solyc03g032050.2.1 | Tomato | cytosol | 59.81 | 15.8 |
| CDY18578 | Canola | cytosol | 57.01 | 15.68 |
| KRH39402 | Soybean | cytosol | 57.01 | 15.44 |
| VIT_07s0031g02260.t01 | Wine grape | cytosol | 57.94 | 15.38 |
| GSMUA_Achr2P11020_001 | Banana | cytosol, golgi, peroxisome, plastid | 29.91 | 10.42 |
Protein Annotations
| EnsemblPlants:Zm00001d043645_P001 | EnsemblPlants:Zm00001d043645_T001 | EnsemblPlantsGene:Zm00001d043645 | InterPro:Alpha/Gamma-adaptin-bd_p34 | PANTHER:PTHR14659 | ProteinID:ONM38630.1 |
| UniParc:UPI0008452361 | UniProt:A0A1D6NDR5 | MapMan:35.2 | : | : | : |
Description
GTP binding
Coordinates
chr3:+:205822613..205823796
Molecular Weight (calculated)
12205.3 Da
IEP (calculated)
4.155
GRAVY (calculated)
-0.260
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEILLCIGN KADLIPDHSV QNIEYIEAFA SNADFDKYRS VDGDSQGLVD GDSQGLERLL GALSAHMWPG IILKSRNRIT TPFLVEKQES KYDEFNYDLE
101: YEVVSWI
101: YEVVSWI
001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE
Arabidopsis Description
GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.