Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81426 | Canola | nucleus | 72.26 | 74.74 |
| CDY18578 | Canola | cytosol | 71.25 | 71.98 |
| Bra037194.1-P | Field mustard | nucleus | 71.25 | 71.61 |
| Zm00001d007683_P001 | Maize | extracellular | 12.72 | 60.98 |
| Zm00001d043645_P001 | Maize | cytosol | 16.03 | 58.88 |
| KRH39402 | Soybean | cytosol | 58.52 | 58.23 |
| VIT_07s0031g02260.t01 | Wine grape | cytosol | 59.54 | 58.06 |
| KRH07810 | Soybean | cytosol | 57.25 | 57.11 |
| PGSC0003DMT400048040 | Potato | cytosol | 57.51 | 55.8 |
| Solyc03g032050.2.1 | Tomato | cytosol | 57.0 | 55.31 |
| GSMUA_Achr4P29710_001 | Banana | cytosol | 53.18 | 52.12 |
| EES11323 | Sorghum | cytosol | 49.36 | 46.75 |
| Os04t0584800-01 | Rice | cytosol | 48.85 | 45.93 |
| Zm00001d002538_P001 | Maize | cytosol | 46.82 | 44.34 |
| TraesCS2A01G455900.1 | Wheat | cytosol | 46.31 | 43.33 |
| TraesCS2D01G456200.1 | Wheat | cytosol | 46.06 | 43.1 |
| TraesCS2B01G477900.1 | Wheat | cytosol | 45.8 | 42.76 |
| Zm00001d010979_P001 | Maize | nucleus | 8.91 | 37.63 |
| GSMUA_Achr2P11020_001 | Banana | cytosol, golgi, peroxisome, plastid | 27.23 | 34.85 |
| Zm00001d008959_P001 | Maize | plastid | 19.85 | 28.06 |
| Zm00001d049633_P002 | Maize | mitochondrion | 15.01 | 27.44 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.2 | EntrezGene:836726 | ProteinID:AED98132.1 | ArrayExpress:AT5G65960 | EnsemblPlantsGene:AT5G65960 |
| RefSeq:AT5G65960 | TAIR:AT5G65960 | RefSeq:AT5G65960-TAIR-G | EnsemblPlants:AT5G65960.1 | TAIR:AT5G65960.1 | EMBL:AY065381 |
| EMBL:AY117200 | InterPro:Alpha/Gamma-adaptin-bd_p34 | Unigene:At.28639 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | RefSeq:NP_569023.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PFAM:PF10199 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR14659 |
| UniProt:Q8VZ15 | SUPFAM:SSF52540 | InterPro:Small_GTPase | UniParc:UPI000009EE51 | SEG:seg | : |
Description
GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
Coordinates
chr5:+:26385348..26387447
Molecular Weight (calculated)
43690.4 Da
IEP (calculated)
4.020
GRAVY (calculated)
-0.466
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.