Factsheet for GSMUA_Achr4P29710_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007683_P001	Maize	extracellular	13.97	68.29
Zm00001d043645_P001	Maize	cytosol	16.96	63.55
Os04t0584800-01	Rice	cytosol	61.85	59.33
TraesCS2A01G455900.1	Wheat	cytosol	61.1	58.33
EES11323	Sorghum	cytosol	60.35	58.31
TraesCS2D01G456200.1	Wheat	cytosol	60.6	57.86
Zm00001d002538_P001	Maize	cytosol	59.1	57.11
TraesCS2B01G477900.1	Wheat	cytosol	59.35	56.53
VIT_07s0031g02260.t01	Wine grape	cytosol	55.36	55.09
AT5G65960.1	Thale cress	cytosol	52.12	53.18
PGSC0003DMT400048040	Potato	cytosol	53.37	52.84
Solyc03g032050.2.1	Tomato	cytosol	52.87	52.35
KRH39402	Soybean	cytosol	51.12	51.9
CDX81426	Canola	nucleus	48.38	51.05
KRH07810	Soybean	cytosol	50.12	51.02
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	38.4	50.16
CDY18578	Canola	cytosol	48.13	49.61
Bra037194.1-P	Field mustard	nucleus	47.38	48.59
Zm00001d010979_P001	Maize	nucleus	8.73	37.63
Zm00001d049633_P002	Maize	mitochondrion	16.46	30.7
Zm00001d008959_P001	Maize	plastid	19.95	28.78

Protein Annotations

EnsemblPlants:GSMUA_Achr4P29710_001	EnsemblPlants:GSMUA_Achr4T29710_001	EnsemblPlantsGene:GSMUA_Achr4G29710_001	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:Alpha/Gamma-adaptin-bd_p34
InterPro:P-loop_NTPase	InterPro:Small_GTPase	PANTHER:PTHR14659	PFAM:PF00071	PFAM:PF10199	SEG:seg
SUPFAM:SSF52540	UniParc:UPI000294FD68	UniProt:M0ST83	MapMan:35.2	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G29710_001]

Coordinates

chr4:-:27567717..27572377

Molecular Weight (calculated)

44625.6 Da

IEP (calculated)

4.001

GRAVY (calculated)

-0.474

Length

401 amino acids

Sequence
(BLAST)

001: MAAADNGGGS GGGSGSLETR PGVLLVGSPN VGKRTLFSRL LSIEFPDTSD LSTGVFCQGW TIDTKYYTAD LSIWTAHLDE EFSFRSLPIS KQLDALVMVF
101: DMSDESSFVA LQDWVAKTDI QKFEILLCIG NKADLVTGHY AHTEYRRCMQ KCGESSSDPH PEYVDYGIDE TEACSLLENE EPSLEIRKSC LDWCIEHNIE
201: YIEACASNAD FDKCLSVDGD MQGVDRLYGA LSAHMWPGMI LKSGNKIINP SLVEKEESTD DESEYEIEYE ALSHGSDEEW SGYSDAVVTR THNETADGIN
301: QDPKHEMSNI HEAEGEISVE QKPGSNFEEQ EELGSDVVNI NDLDEDAHYG LDDLERLMFE IGNMRDNLRL MPDFQRREMA ANLAMKMAAM FGDVSDDENG
401: L

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.