Factsheet for TraesCS2B01G477900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G456200.1	Wheat	cytosol	95.25	95.48
TraesCS2A01G455900.1	Wheat	cytosol	95.01	95.24
Os04t0584800-01	Rice	cytosol	76.48	77.03
EES11323	Sorghum	cytosol	72.21	73.25
Zm00001d002538_P001	Maize	cytosol	70.78	71.81
Zm00001d043645_P001	Maize	cytosol	17.34	68.22
Zm00001d007683_P001	Maize	extracellular	12.83	65.85
GSMUA_Achr4P29710_001	Banana	cytosol	56.53	59.35
Zm00001d010979_P001	Maize	nucleus	12.59	56.99
VIT_07s0031g02260.t01	Wine grape	cytosol	48.69	50.87
KRH07810	Soybean	cytosol	44.18	47.21
CDX81426	Canola	nucleus	42.28	46.84
KRH39402	Soybean	cytosol	43.94	46.84
AT5G65960.1	Thale cress	cytosol	42.76	45.8
CDY18578	Canola	cytosol	42.04	45.5
Bra037194.1-P	Field mustard	nucleus	41.81	45.01
PGSC0003DMT400048040	Potato	cytosol	43.23	44.94
Solyc03g032050.2.1	Tomato	cytosol	42.52	44.2
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	29.22	40.07
Zm00001d049633_P002	Maize	mitochondrion	19.48	38.14
Zm00001d008959_P001	Maize	plastid	23.28	35.25

Protein Annotations

EnsemblPlants:TraesCS2B01G477900.1	EnsemblPlantsGene:TraesCS2B01G477900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:Alpha/Gamma-adaptin-bd_p34	InterPro:P-loop_NTPase	InterPro:Small_GTPase
PANTHER:PTHR14659	PFAM:PF00071	PFAM:PF10199	SEG:seg	SUPFAM:SSF52540	TIGR:cd00882
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:675345294..675348841

Molecular Weight (calculated)

46753.0 Da

IEP (calculated)

4.095

GRAVY (calculated)

-0.548

Length

421 amino acids

Sequence
(BLAST)

001: MEEGGDASLE ARPGVLLVGA PGVGKRTILS RLIGTELPDT SDLSSGVLCQ GWKIDTKYYS ADISIWTTHL EEGFSLGSLP HLDQLAALIM VFDMNDEPSL
101: LTLRNWVGNI DVQRFEVLLC IGNKADLVPG HGAHVEYRRR MQRIGESSSD PHPEYLDFGI NENEGCGLLS EEEPQIEIRD STLKWCIEHN IEYIEACASN
201: ADFDKCLSVD GDSQGLERLF GALSAHMWPG MILKSGNKIT TPSLVEKDES TDDELTYEFD YEVLSHASDE QWEFVGESST SRSLEGLDEA KSMQDNTQQV
301: VNGNASSLAP NPLPHDRSTE PAKENPVTQS HTTEDSNNHV DNTEADTSEE DQRTDTPEVD TLFEDDHYGV DDLERLMSEI GNMRSNLRLV PDFQRREMAA
401: KIAMKMATMF GDSDDEGFHA V

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.