CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39402	Soybean	cytosol	92.13	91.9
Zm00001d007683_P001	Maize	extracellular	13.96	67.07
Zm00001d043645_P001	Maize	cytosol	15.99	58.88
AT5G65960.1	Thale cress	cytosol	57.11	57.25
VIT_07s0031g02260.t01	Wine grape	cytosol	58.38	57.07
CDX81426	Canola	nucleus	54.82	56.84
CDY18578	Canola	cytosol	54.57	55.27
Bra037194.1-P	Field mustard	nucleus	54.82	55.24
Solyc03g032050.2.1	Tomato	cytosol	54.06	52.59
PGSC0003DMT400048040	Potato	cytosol	53.81	52.35
GSMUA_Achr4P29710_001	Banana	cytosol	51.02	50.12
EES11323	Sorghum	cytosol	48.98	46.51
Zm00001d002538_P001	Maize	cytosol	47.72	45.3
TraesCS2A01G455900.1	Wheat	cytosol	48.22	45.24
Os04t0584800-01	Rice	cytosol	47.97	45.22
TraesCS2D01G456200.1	Wheat	cytosol	47.97	45.0
TraesCS2B01G477900.1	Wheat	cytosol	47.21	44.18
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	27.92	35.83
Zm00001d010979_P001	Maize	nucleus	7.87	33.33
Zm00001d008959_P001	Maize	plastid	19.04	26.98
Zm00001d049633_P002	Maize	mitochondrion	13.96	25.58

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	EMBL:ACUP02010114	InterPro:Alpha/Gamma-adaptin-bd_p34	EnsemblPlantsGene:GLYMA_16G112300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:I1MMT4	EnsemblPlants:KRH07810	ProteinID:KRH07810	ProteinID:KRH07810.1	InterPro:P-loop_NTPase	PFAM:PF00071
PFAM:PF10199	PANTHER:PTHR14659	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI000233B622
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:24949192..24951632

Molecular Weight (calculated)

43836.6 Da

IEP (calculated)

4.141

GRAVY (calculated)

-0.551

Length

394 amino acids

Sequence
(BLAST)

001: MESQTDLQNR PGIFIIGSSN VGKRTLLSRL TSVDVDDAFD SASQVNVHGW TINNKYYTAD VSLWMAHLHD DFSAANVTLS RRMTALVMVF DMNEPSSLAA
101: LREWVSRTDI QNFEILLCIG NKVDLVPSHP AHAEYRRRLL KLEDSAADFY SEEYGISESE GTSLLGDEEP SWDIRRSCLD WCTDHNIEFI EACASNADFD
201: KCLSIDGDLQ GVERLYGALS AHMWPGMVLK SGNRINQLSF PEKEELSSEE SDYEQEYEVL SAGSADWDES EQGWISASSL DSGGSAPQNN PGTVGQHEDG
301: IKSDKESHPT TSSTAIQDES EKDMVHNTMD SEGDGKENEG KCLELEDLEH LMSEIGNMRA GLRLMPDFQR RDMAAKLAMK MASIFGGESD EEEI

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.