Factsheet for GSMUA_Achr2P11020_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P29710_001	Banana	cytosol	50.16	38.4
Zm00001d007683_P001	Maize	extracellular	8.79	32.93
VIT_07s0031g02260.t01	Wine grape	cytosol	41.04	31.27
Os04t0584800-01	Rice	cytosol	41.69	30.62
Zm00001d043645_P001	Maize	cytosol	10.42	29.91
TraesCS2A01G455900.1	Wheat	cytosol	40.72	29.76
EES11323	Sorghum	cytosol	40.07	29.64
TraesCS2D01G456200.1	Wheat	cytosol	40.39	29.52
TraesCS2B01G477900.1	Wheat	cytosol	40.07	29.22
CDX81426	Canola	nucleus	36.16	29.21
Solyc03g032050.2.1	Tomato	cytosol	38.44	29.14
Zm00001d002538_P001	Maize	cytosol	39.09	28.92
PGSC0003DMT400048040	Potato	cytosol	38.11	28.89
CDY18578	Canola	cytosol	35.83	28.28
KRH39402	Soybean	cytosol	36.16	28.1
KRH07810	Soybean	cytosol	35.83	27.92
Bra037194.1-P	Field mustard	nucleus	35.18	27.62
AT5G65960.1	Thale cress	cytosol	34.85	27.23
Zm00001d010979_P001	Maize	nucleus	6.19	20.43
Zm00001d008959_P001	Maize	plastid	15.31	16.91
Zm00001d049633_P002	Maize	mitochondrion	11.73	16.74

Protein Annotations

EnsemblPlants:GSMUA_Achr2P11020_001	EnsemblPlants:GSMUA_Achr2T11020_001	EnsemblPlantsGene:GSMUA_Achr2G11020_001	Gene3D:3.40.50.300	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Alpha/Gamma-adaptin-bd_p34	InterPro:P-loop_NTPase	PANTHER:PTHR14659	PFAM:PF10199	SEG:seg
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000296EDDD	UniProt:M0S6Z3	MapMan:35.2	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G11020_001]

Coordinates

chr2:-:13986691..13991659

Molecular Weight (calculated)

34677.3 Da

IEP (calculated)

4.462

GRAVY (calculated)

-0.079

Length

307 amino acids

Sequence
(BLAST)

001: MSDLGDGATS CGAGASSVET RQRRSSSNVG KRTLLSRLLL IDFPDTSDLS TGILWWAIGK YYTADLSIWT AHLDEQFSIR SMPIYKQLDA LAMVFDMSDE
101: YSFTALQGLV HQAYYIIYRI LCLDDKCLLV DGDIQGIDRL YGALSAHMWP GMILKSGNKT TNPSLLSYIY SLFFYLLPVI LELNPSCSSA GMFLTVSAYF
201: FLLRTNLNSL FFVFVSLPMT EFTDDEIKYE SLSHEQKPRS NFEQEELESD VVNTTKLDED AYDGLADLQR LTYEIGNIHD NFRLMPDSQR REMDPKLAMK
301: TAATFGG

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.