Factsheet for Zm00001d002538_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11323	Sorghum	cytosol	91.08	91.08
Zm00001d010979_P001	Maize	nucleus	17.59	78.49
Zm00001d043645_P001	Maize	cytosol	19.52	75.7
Zm00001d007683_P001	Maize	extracellular	14.94	75.61
Os04t0584800-01	Rice	cytosol	75.9	75.36
TraesCS2A01G455900.1	Wheat	cytosol	73.98	73.1
TraesCS2D01G456200.1	Wheat	cytosol	73.25	72.38
TraesCS2B01G477900.1	Wheat	cytosol	71.81	70.78
GSMUA_Achr4P29710_001	Banana	cytosol	57.11	59.1
VIT_07s0031g02260.t01	Wine grape	cytosol	49.88	51.36
KRH07810	Soybean	cytosol	45.3	47.72
CDX81426	Canola	nucleus	43.61	47.63
KRH39402	Soybean	cytosol	44.82	47.09
AT5G65960.1	Thale cress	cytosol	44.34	46.82
Bra037194.1-P	Field mustard	nucleus	43.61	46.29
CDY18578	Canola	cytosol	43.37	46.27
Zm00001d049633_P002	Maize	mitochondrion	23.86	46.05
PGSC0003DMT400048040	Potato	cytosol	44.1	45.19
Solyc03g032050.2.1	Tomato	cytosol	43.13	44.2
Zm00001d008959_P001	Maize	plastid	28.67	42.81
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	28.92	39.09

Protein Annotations

EntrezGene:100273127	Gene3D:3.40.50.300	MapMan:35.2	InterPro:Alpha/Gamma-adaptin-bd_p34	UniProt:B4FT35	EMBL:BT040273
EMBL:BT040722	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	ProteinID:ONM14622.1	InterPro:P-loop_NTPase	PFAM:PF00071	PFAM:PF10199
PANTHER:PTHR14659	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI00017B76E6	EnsemblPlantsGene:Zm00001d002538	EnsemblPlants:Zm00001d002538_P001
EnsemblPlants:Zm00001d002538_T001	SEG:seg	:	:	:	:

Description

GTP binding

Coordinates

chr2:-:14986698..14990518

Molecular Weight (calculated)

46169.2 Da

IEP (calculated)

4.111

GRAVY (calculated)

-0.536

Length

415 amino acids

Sequence
(BLAST)

001: MEGSLEARPG VLLVGAPGVG KRTILSQFLG AEIPDVHDLS SGVLCQGWTI ETKYYSADLS IWTANLGEEF SLDSLPHLDR VAALVMVFDM SDESTLLTLQ
101: SWAASVDIQR FEILLCVGNK ADLVPGHSVH VEYRRRMQNL GESSSDPHPD YFNFGINESE GCSLLSEEEP CIKIRNSTAQ WCIEQNIEYI EACASNADFD
201: KCLSVDGDSQ GLERLLGALS AHMWPGMILK SGNRITVPSL VEKQESTDDE SNYDFEYEVL SHGSDDQWEF IGETSTSRRF ERPNEPDGAQ DHTHQVVNAG
301: TDSSASNSPP TNTPTETAEE NTVTQSNKTD NSDHVDKTTA YSTEDHQSDL REANHLFEDE HYGLDDLEKI MSEIGNMRSN LRLMPDFQRR EMAAKLAMKM
401: AAMFGDDDEE AFDDI

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.