CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037194.1-P	Field mustard	nucleus	95.63	95.14
CDX81426	Canola	nucleus	88.69	90.79
AT5G65960.1	Thale cress	cytosol	71.98	71.25
Zm00001d007683_P001	Maize	extracellular	12.85	60.98
Zm00001d043645_P001	Maize	cytosol	15.68	57.01
KRH39402	Soybean	cytosol	56.56	55.7
VIT_07s0031g02260.t01	Wine grape	cytosol	56.81	54.84
KRH07810	Soybean	cytosol	55.27	54.57
Solyc03g032050.2.1	Tomato	cytosol	53.98	51.85
PGSC0003DMT400048040	Potato	cytosol	53.98	51.85
GSMUA_Achr4P29710_001	Banana	cytosol	49.61	48.13
EES11323	Sorghum	cytosol	48.84	45.78
Os04t0584800-01	Rice	cytosol	48.07	44.74
Zm00001d002538_P001	Maize	cytosol	46.27	43.37
TraesCS2A01G455900.1	Wheat	cytosol	46.02	42.62
TraesCS2B01G477900.1	Wheat	cytosol	45.5	42.04
TraesCS2D01G456200.1	Wheat	cytosol	44.99	41.67
GSMUA_Achr2P11020_001	Banana	cytosol, golgi, peroxisome, plastid	28.28	35.83
Zm00001d010979_P001	Maize	nucleus	8.48	35.48
Zm00001d049633_P002	Maize	mitochondrion	15.68	28.37
Zm00001d008959_P001	Maize	plastid	19.28	26.98

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078G1U2	UniProt:A0A078G1U2	InterPro:Alpha/Gamma-adaptin-bd_p34	EnsemblPlants:CDY18578
ProteinID:CDY18578	ProteinID:CDY18578.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00005630001	InterPro:P-loop_NTPase	PFAM:PF00071
PFAM:PF10199	PANTHER:PTHR14659	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0004EECF47	SEG:seg

Description

BnaA09g08170DBnaA09g08170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1U2]

Coordinates

chrLK032087:+:45275..47438

Molecular Weight (calculated)

42996.5 Da

IEP (calculated)

4.015

GRAVY (calculated)

-0.487

Length

389 amino acids

Sequence
(BLAST)

001: MEEEKTLMEE GRRRPGVLVV GSSGVGKRTL LSRLISVDFE DSSSSQTEVH DWTINTKYYS ADVSVWISHI CDDHSLPQSH PLVALVMVFD LNQMSTLVAL
101: QDWASHADIS SFDILLCIGN KVDLVPHHPA HAEYRRRLSK ASTNLYSDID DEFGISQSEG SSLLGSDDTS SLDIRGTCLE WCRDNNIEFI EACASNPDFD
201: KCLSVDGDSQ GVDRLFGALS AHMWPGMILK SGDKINEPVL PPHGEDLSEE ESEYELEYEV LSSGSADPWE NIDERWVSAD AGGSTSREVD VNPKKVVDDD
301: VVELGSSGTQ SETVVTTTDE KPLEGTEDNN KVYELEDVEQ LMSEIGNIRD NLRLMPDFQR REIAANLAMK MASMFGGGGD DSDNEEESE

Best Arabidopsis Sequence Match ( AT5G65960.1 )
(BLAST)

001: MESRPGVLVV GSSGVGKRTL LSRLLSVEFE DSSESSSQTE VHGWTINTKY YTADVSVCIS HICDEYSLPN LPNSHPLVAL VMVFDLSELS TLVALQDWVS
101: HTDINSFDIL LCIGNKVDRV PHHLAHDEYR RRLLKASDPS RDLYSDIDDF GISETEGSSL LGSEDASLDI RGACLEWCSE NNIEFIEACA SNPDFDKCLS
201: VDGDSQGVER LFGALSAHMW PGMILKSGDR INEPVLPQGE ELSEEESEYE LEYEVLSAGS GDPWDNIEER WVSASETHSH ADAGGSTSQE NLHVENSMVK
301: PNKVDEELLP SGSRLELQND TDRAIVTDEK PLGTENEKCY EFEDVEQLMS EIGNIRDNLR LMPDFQRREI AANLAMKMAS MFGGDTDDEE EPE

Arabidopsis Description

GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.