Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006819.1-P | Field mustard | plastid | 100.0 | 99.69 |
| CDY11868 | Canola | plastid | 98.91 | 98.6 |
| AT5G57460.1 | Thale cress | cytosol | 91.73 | 91.02 |
| CDY25907 | Canola | plastid | 90.33 | 89.77 |
| CDY38299 | Canola | plastid | 88.77 | 88.49 |
| KRG90331 | Soybean | endoplasmic reticulum | 70.98 | 72.22 |
| KRH02873 | Soybean | endoplasmic reticulum, nucleus | 70.67 | 71.9 |
| VIT_11s0052g00920.t01 | Wine grape | mitochondrion | 66.61 | 68.76 |
| PGSC0003DMT400029685 | Potato | cytosol, plastid | 65.83 | 66.46 |
| Solyc10g078790.1.1 | Tomato | nucleus | 65.52 | 66.14 |
| GSMUA_Achr3P27960_001 | Banana | plastid | 59.13 | 57.86 |
| EES14778 | Sorghum | plastid | 56.01 | 56.36 |
| Os08t0243900-01 | Rice | plasma membrane, plastid | 56.01 | 56.01 |
| HORVU2Hr1G002480.5 | Barley | cytosol | 36.66 | 55.04 |
| TraesCS2B01G003600.1 | Wheat | plastid | 54.13 | 54.99 |
| Zm00001d024416_P001 | Maize | plasma membrane | 54.45 | 54.79 |
| TraesCS2D01G014900.1 | Wheat | plastid | 54.13 | 54.47 |
| TraesCS2A01G014200.1 | Wheat | plastid | 53.82 | 54.33 |
| HORVU2Hr1G002410.2 | Barley | plastid | 54.6 | 50.8 |
Protein Annotations
| EnsemblPlants:CDX88623 | EnsemblPlantsGene:GSBRNA2T00148660001 | InterPro:IPR028565 | InterPro:MHD | InterPro:Muniscin_C | PANTHER:PTHR37769 |
| PFAM:PF10291 | PFscan:PS51072 | ProteinID:CDX88623 | ProteinID:CDX88623.1 | SEG:seg | UniParc:UPI0004EF4483 |
| MapMan:22.1.4.2 | : | : | : | : | : |
Description
BnaA03g10260D
Coordinates
chrLK031856:+:223260..225492
Molecular Weight (calculated)
69983.5 Da
IEP (calculated)
4.962
GRAVY (calculated)
-0.270
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCLALALQP VNGSDILLQT REWFPPARAL IALSYFRQTR QAFSSSKQQQ PPSNRKHTQP SSSSSAADPD DAAAAEFVGD DPLAASNGQV IVGVESKYRV
101: VYRLVNSIYI LGVTVADHDN SINVFECIHI VNQAVSVIVT ACRGVEVTPE KLGRKYAEVY MALDIVLRGV SNIRLAAMLG AMHGDGIAKM VHSALDTENK
201: IRGADSWMAV ESHAAEHQAA VNAFSNARFE LPAETIAAGD EMAASLAPVV QETEQVKEEP EVENKDPFAA SEEINKEKEL VGGFKKTKDP SSQDLTLALA
301: GLEVTTLPPA EATQSTHINV EGFEGEYGGI AFSNEQATIG ETFESFSDAW GGGLDPSEFM GPKKIQKKEG LGGLELLHTS DPKAVEGKDG GNVDNLVKKP
401: EMKGPEMYIS EEIRTEFRES LLARVGLMGV IYLKTMPPKG SGEEKETEFS FRVEGTTPVK RFSMQSSRIS SLGNGLFHVR TAPSEEPIPI LKYSLQPKLT
501: PLPLRVRMVK RVSGTLLSLM IQYVSSPDLP QPLKDVDFIL KLPVDPTLLK VSPKAILNRT DRELKWQVPE IPLNGSPGRL RARMPLDSDN SEEEPEIICY
601: VKFSVQGKSS LSGISLRPAA EGNMDFYEVD HKFETGVYMC N
101: VYRLVNSIYI LGVTVADHDN SINVFECIHI VNQAVSVIVT ACRGVEVTPE KLGRKYAEVY MALDIVLRGV SNIRLAAMLG AMHGDGIAKM VHSALDTENK
201: IRGADSWMAV ESHAAEHQAA VNAFSNARFE LPAETIAAGD EMAASLAPVV QETEQVKEEP EVENKDPFAA SEEINKEKEL VGGFKKTKDP SSQDLTLALA
301: GLEVTTLPPA EATQSTHINV EGFEGEYGGI AFSNEQATIG ETFESFSDAW GGGLDPSEFM GPKKIQKKEG LGGLELLHTS DPKAVEGKDG GNVDNLVKKP
401: EMKGPEMYIS EEIRTEFRES LLARVGLMGV IYLKTMPPKG SGEEKETEFS FRVEGTTPVK RFSMQSSRIS SLGNGLFHVR TAPSEEPIPI LKYSLQPKLT
501: PLPLRVRMVK RVSGTLLSLM IQYVSSPDLP QPLKDVDFIL KLPVDPTLLK VSPKAILNRT DRELKWQVPE IPLNGSPGRL RARMPLDSDN SEEEPEIICY
601: VKFSVQGKSS LSGISLRPAA EGNMDFYEVD HKFETGVYMC N
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.