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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000163.1-P
Bra000201.1-P
Bra000335.1-P
Bra001010.1-P
Bra001415.1-P
Bra002259.1-P
Bra002427.1-P
Bra003009.1-P
Bra003016.1-P
Bra004269.1-P
Bra005531.1-P
Bra005688.1-P
Bra006374.1-P
Bra006664.1-P
Bra008279.1-P
Bra009790.1-P
Bra010799.1-P
Bra012247.1-P
Bra012595.1-P
Bra013314.1-P
Bra013634.1-P
Bra016455.1-P
Bra016976.1-P
Bra017039.1-P
Bra017383.1-P
Bra018558.1-P
Bra018851.1-P
Bra019366.1-P
Bra020060.1-P
Bra020836.1-P
Bra021826.1-P
Bra022067.1-P
Bra022180.1-P
Bra022547.1-P
Bra022695.1-P
Bra022696.1-P
Bra022908.1-P
Bra023586.1-P
Bra025079.1-P
Bra025548.1-P
Bra025842.1-P
Bra026139.1-P
Bra026769.1-P
Bra027685.1-P
Bra027808.1-P
Bra028252.1-P
Bra028475.1-P
Bra028899.1-P
Bra029043.1-P
Bra030488.1-P
Bra034824.1-P
Bra036092.1-P
Bra036274.1-P
Bra036523.1-P
Bra036641.1-P
Bra038667.1-P
Bra039131.1-P
Bra040507.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57460.1 Bra026139.1-P AT1G15370.1 24529374
AT5G57460.1 Bra026769.1-P AT1G15370.1 24529374
AT5G57460.1 Bra012247.1-P AT1G20760.1 24529374
AT5G57460.1 Bra016455.1-P AT1G20760.1 24529374
AT5G57460.1 Bra025842.1-P AT1G20760.1 24529374
AT5G57460.1 Bra018851.1-P AT1G50480.1 24529374
AT5G57460.1 Bra030488.1-P AT1G50480.1 24529374
AT5G57460.1 Bra027808.1-P AT1G63250.1 24529374
AT5G57460.1 Bra027685.1-P AT1G64190.1 24529374
AT5G57460.1 Bra004269.1-P AT1G67930.1 24529374
AT5G57460.1 Bra008279.1-P AT1G76810.1 24529374
AT5G57460.1 Bra017383.1-P AT2G03510.1 24529374
AT5G57460.1 Bra006374.1-P AT2G20800.1 24529374
AT5G57460.1 Bra023586.1-P AT2G20800.1 24529374
AT5G57460.1 Bra005531.1-P AT2G33040.1 24529374
AT5G57460.1 Bra021826.1-P AT2G33040.1 24529374
AT5G57460.1 Bra022908.1-P AT2G33040.1 24529374
AT5G57460.1 Bra000163.1-P AT2G40060.1 24529374
AT5G57460.1 Bra017039.1-P AT2G40060.1 24529374
AT5G57460.1 Bra000201.1-P AT2G40730.1 24529374
AT5G57460.1 Bra016976.1-P AT2G40730.1 24529374
AT5G57460.1 Bra000335.1-P AT2G43950.1 24529374
AT5G57460.1 Bra001010.1-P AT3G01280.1 24529374
AT5G57460.1 Bra006664.1-P AT3G01280.1 24529374
AT5G57460.1 Bra039131.1-P AT3G01280.1 24529374
AT5G57460.1 Bra040507.1-P AT3G01280.1 24529374
AT5G57460.1 Bra022067.1-P AT3G01780.1 24529374
AT5G57460.1 Bra001415.1-P AT3G11630.1 24529374
AT5G57460.1 Bra034824.1-P AT3G11630.1 24529374
AT5G57460.1 Bra038667.1-P AT3G11630.1 24529374
AT5G57460.1 Bra022180.1-P AT3G16810.1 24529374
AT5G57460.1 Bra036641.1-P AT3G16810.1 24529374
AT5G57460.1 Bra036092.1-P AT3G50590.1 24529374
AT5G57460.1 Bra018558.1-P AT4G02350.1 24529374
AT5G57460.1 Bra036274.1-P AT4G02350.1 24529374
AT5G57460.1 Bra012595.1-P AT4G18480.1 24529374
AT5G57460.1 Bra013314.1-P AT4G18480.1 24529374
AT5G57460.1 Bra013634.1-P AT4G22690.1 24529374
AT5G57460.1 Bra019366.1-P AT4G22690.1 24529374
AT5G57460.1 Bra020836.1-P AT4G22690.1 24529374
AT5G57460.1 Bra005688.1-P AT5G01380.1 24529374
AT5G57460.1 Bra028899.1-P AT5G01380.1 24529374
AT5G57460.1 Bra002259.1-P AT5G19760.1 24529374
AT5G57460.1 Bra020060.1-P AT5G19760.1 24529374
AT5G57460.1 Bra002427.1-P AT5G22770.1 24529374
AT5G57460.1 Bra009790.1-P AT5G24710.1 24529374
AT5G57460.1 Bra010799.1-P AT5G24710.1 24529374
AT5G57460.1 Bra036523.1-P AT5G24710.1 24529374
AT5G57460.1 Bra025548.1-P AT5G40770.1 24529374
AT5G57460.1 Bra028475.1-P AT5G40770.1 24529374
AT5G57460.1 Bra025079.1-P AT5G45390.1 24529374
AT5G57460.1 Bra022547.1-P AT5G51430.1 24529374
AT5G57460.1 Bra028252.1-P AT5G51430.1 24529374
AT5G57460.1 Bra003016.1-P AT5G54100.1 24529374
AT5G57460.1 Bra022695.1-P AT5G54100.1 24529374
AT5G57460.1 Bra022696.1-P AT5G54100.1 24529374
AT5G57460.1 Bra029043.1-P AT5G54100.1 24529374
AT5G57460.1 Bra003009.1-P AT5G54160.1 24529374
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88623 Canola plastid 99.69 100.0
AT5G57460.1 Thale cress cytosol 91.6 91.18
Bra002727.1-P Field mustard plastid 88.96 89.38
KRG90331 Soybean endoplasmic reticulum 70.76 72.22
KRH02873 Soybean endoplasmic reticulum, nucleus 70.45 71.9
VIT_11s0052g00920.t01 Wine grape mitochondrion 66.41 68.76
PGSC0003DMT400029685 Potato cytosol, plastid 65.63 66.46
Solyc10g078790.1.1 Tomato nucleus 65.32 66.14
GSMUA_Achr3P27960_001 Banana plastid 58.94 57.86
EES14778 Sorghum plastid 55.83 56.36
Os08t0243900-01 Rice plasma membrane, plastid 55.83 56.01
HORVU2Hr1G002480.5 Barley cytosol 36.55 55.04
TraesCS2B01G003600.1 Wheat plastid 53.97 54.99
Zm00001d024416_P001 Maize plasma membrane 54.28 54.79
TraesCS2D01G014900.1 Wheat plastid 53.97 54.47
TraesCS2A01G014200.1 Wheat plastid 53.65 54.33
HORVU2Hr1G002410.2 Barley plastid 54.43 50.8
Protein Annotations
EnsemblPlants:Bra006819.1EnsemblPlants:Bra006819.1-PEnsemblPlantsGene:Bra006819InterPro:IPR028565InterPro:MHDInterPro:Muniscin_C
PANTHER:PTHR37769PFAM:PF10291PFscan:PS51072SEG:segUniParc:UPI000253FCA5UniProt:M4CRH8
MapMan:22.1.4.2:::::
Description
AT5G57460 (E=0.0) | unknown protein
Coordinates
chrA03:-:5187880..5189811
Molecular Weight (calculated)
70157.7 Da
IEP (calculated)
4.962
GRAVY (calculated)
-0.272
Length
643 amino acids
Sequence
(BLAST)
001: MSCLALALQP VNGSDILLQT REWFPPARAL IALSYFRQTR QAFSSSKQQQ PPSNRKHTQP SSSSSSSAAD PDDAAAAEFV GDDPLAASNG QVIVGVESKY
101: RVVYRLVNSI YILGVTVADH DNSINVFECI HIVNQAVSVI VTACRGVEVT PEKLGRKYAE VYMALDIVLR GVSNIRLAAM LGAMHGDGIA KMVHSALDTE
201: NKIRGADSWM AVESHAAEHQ AAVNAFSNAR FELPAETIAA GDEMAASLAP VVQETEQVKE EPEVENKDPF AASEEINKEK ELVGGFKKTK DPSSQDLTLA
301: LAGLEVTTLP PAEATQSTHI NVEGFEGEYG GIAFSNEQAT IGETFESFSD AWGGGLDPSE FMGPKKIQKK EGLGGLELLH TSDPKAVEGK DGGNVDNLVK
401: KPEMKGPEMY ISEEIRTEFR ESLLARVGLM GVIYLKTMPP KGSGEEKETE FSFRVEGTTP VKRFSMQSSR ISSLGNGLFH VRTAPSEEPI PILKYSLQPK
501: LTPLPLRVRM VKRVSGTLLS LMIQYVSSPD LPQPLKDVDF ILKLPVDPTL LKVSPKAILN RTDRELKWQV PEIPLNGSPG RLRARMPLDS DNSEEEPEII
601: CYVKFSVQGK SSLSGISLRP AAEGNMDFYE VDHKFETGVY MCN
Best Arabidopsis Sequence Match ( AT5G57460.1 )
(BLAST)
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.