Factsheet for Bra025079.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39425	Canola	plastid	98.96	98.96
CDY38981	Canola	plastid	97.92	96.91
AT5G45390.1	Thale cress	plastid	97.22	95.89
GSMUA_Achr6P01290_001	Banana	extracellular, peroxisome, plastid	63.89	83.64
VIT_12s0028g01250.t01	Wine grape	plastid	71.88	71.13
KRH39679	Soybean	nucleus, plastid	72.92	68.63
KRH76388	Soybean	nucleus, plastid	72.22	67.97
PGSC0003DMT400079259	Potato	plastid	66.32	63.88
EER94414	Sorghum	plastid	62.15	61.94
Solyc08g075750.2.1	Tomato	plastid	63.89	60.93
Os10t0580800-01	Rice	plastid	61.46	60.41
TraesCS1B01G213300.1	Wheat	plastid	59.72	58.11
TraesCS1D01G202100.1	Wheat	plastid	59.38	57.77
TraesCS1A01G198400.1	Wheat	plastid	59.38	57.77
Zm00001d030149_P001	Maize	mitochondrion	62.5	56.6
Bra009331.1-P	Field mustard	mitochondrion	28.47	34.45
Bra004177.1-P	Field mustard	plastid	36.81	33.87
Bra013020.1-P	Field mustard	mitochondrion	27.43	33.62
Bra033332.1-P	Field mustard	plastid	33.33	32.65
Bra030504.1-P	Field mustard	plastid	32.99	31.77
Bra016816.1-P	Field mustard	plastid	26.39	28.15
Bra031777.1-P	Field mustard	plastid	26.39	27.84
Bra019764.1-P	Field mustard	plastid	25.69	26.52
Bra040108.1-P	Field mustard	plastid	26.74	25.25
Bra012683.1-P	Field mustard	plastid	26.39	24.76
Bra030756.1-P	Field mustard	plastid	26.39	23.53
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.69	18.93
Bra014229.1-P	Field mustard	plastid	22.92	17.01

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EnsemblPlantsGene:Bra025079	EnsemblPlants:Bra025079.1	EnsemblPlants:Bra025079.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009532	GO:GO:0009535	GO:GO:0009536	GO:GO:0009570
GO:GO:0009579	GO:GO:0009658	GO:GO:0009840	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	GO:GO:0048510	UniProt:M4E8H3	HAMAP:MF_00444
PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF24	SUPFAM:SSF52096
UniParc:UPI000253F5B4	SEG:seg	:	:	:	:

Description

AT5G45390 (E=2e-127) CLPP4, NCLPP4 | CLPP4 (CLP PROTEASE P4); serine-type endopeptidase

Coordinates

chrA06:-:25034482..25035520

Molecular Weight (calculated)

31144.5 Da

IEP (calculated)

5.181

GRAVY (calculated)

-0.018

Length

288 amino acids

Sequence
(BLAST)

001: MTTLSLSSSF KPSLVSSRLS SSSSASYSSF SKPNNLSLKP TKLISPPLRT PVRFANASIE MSQTQESAIR GAESDVMGLL LRERIVFLGS SIDDFVADAI
101: MSQLLLLDAK DPKKDIKLFI NSSGGSLSAT MAIYDVVQLV RADVSTIALG IAASTASIIL GAGTKGKRFA MPNTRIMIHQ PLGGASGQAI DVEIQAKEVM
201: HNKNNVTSII AGCTSRSFEQ VLKDIDRDRY MSPIEAVEYG LIDGVIDGDS IIPLEPVPDR VKPRVNYEEI SKDPMKFLTP EIPDDEIY

Best Arabidopsis Sequence Match ( AT5G45390.1 )
(BLAST)

001: MGTLSLSSSL KPSLVSSRLN SSSSASSSSF PKPNNLYLKP TKLISPPLRT TSPSPLRFAN ASIEMSQTQE SAIRGAESDV MGLLLRERIV FLGSSIDDFV
101: ADAIMSQLLL LDAKDPKKDI KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI MIHQPLGGAS GQAIDVEIQA
201: KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY

Arabidopsis Description

CLPP4ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94B60]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.