Factsheet for Bra004177.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96137	Canola	plastid	98.72	98.72
AT1G66670.1	Thale cress	plastid	86.26	87.38
KRH70450	Soybean	plastid	66.13	64.89
KRH01676	Soybean	plastid	66.13	64.29
VIT_14s0006g01880.t01	Wine grape	plastid	65.5	64.06
HORVU3Hr1G044510.1	Barley	extracellular	17.57	63.22
Solyc02g091280.2.1	Tomato	plastid	59.42	60.19
PGSC0003DMT400078756	Potato	plastid	59.74	59.55
Os01t0507900-01	Rice	plastid	57.19	57.01
Zm00001d009339_P001	Maize	plastid	54.31	54.84
TraesCS3B01G229600.1	Wheat	plastid	53.67	54.72
TraesCS3A01G197900.1	Wheat	plastid	53.67	54.72
HORVU3Hr1G044530.1	Barley	plastid	53.04	54.43
EES00782	Sorghum	plastid	54.31	54.31
GSMUA_Achr4P13550_001	Banana	plastid	60.7	51.49
Bra025079.1-P	Field mustard	plastid	33.87	36.81
Bra033332.1-P	Field mustard	plastid	33.23	35.37
Bra030504.1-P	Field mustard	plastid	33.55	35.12
Bra013020.1-P	Field mustard	mitochondrion	25.88	34.47
Bra009331.1-P	Field mustard	mitochondrion	26.2	34.45
Bra031777.1-P	Field mustard	plastid	25.56	29.3
Bra016816.1-P	Field mustard	plastid	25.24	29.26
Bra019764.1-P	Field mustard	plastid	22.36	25.09
Bra040108.1-P	Field mustard	plastid	23.32	23.93
Bra012683.1-P	Field mustard	plastid	23.32	23.78
Bra030756.1-P	Field mustard	plastid	23.0	22.29
Bra014229.1-P	Field mustard	plastid	22.36	18.04
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.04	17.65

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EnsemblPlantsGene:Bra004177	EnsemblPlants:Bra004177.1	EnsemblPlants:Bra004177.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009507	GO:GO:0009532
GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009840	GO:GO:0009941
GO:GO:0016787	GO:GO:0019538	UniProt:M4CIZ3	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF20	SUPFAM:SSF52096	UniParc:UPI0002541503
SEG:seg	:	:	:	:	:

Description

AT1G66670 (E=8e-148) CLPP3, NCLPP3 | CLPP3; serine-type endopeptidase

Coordinates

chrA07:-:17222361..17223941

Molecular Weight (calculated)

34458.3 Da

IEP (calculated)

7.953

GRAVY (calculated)

-0.346

Length

313 amino acids

Sequence
(BLAST)

001: MEMSLNLVSS SSSNHVFLFN PILSGKQLSL PSRHQRIPKR AKTFCVRSSM NLSGPRPRQT LSSNWDVSKF SVDSVAQSPS RLPSFEELDT TNMLLRQRIV
101: FLGSQVDDMT ADLVISQLLL LDAQDSERDI TLFINSPGGS ITAGMGIYDA MKQCKADVST VCLGLAASMG AFLLASGSKG KRYCMPNSKV MIHQPLGSAG
201: GKATEMSIRV REMMYHKIKL NKIFSRITGK PESEIEGDTD RDYFLNPWEA KEYGLVDAVI DDGKPGLVAP IGDGTPPPNT KVWDFWKVEG TKNDNKDLPT
301: EQSRVQNGYA TPE

Best Arabidopsis Sequence Match ( AT1G66670.1 )
(BLAST)

001: MEMSLRLASS STSNPICLLN PGKNLNFPIR NHRIPKTSKP FCVRSSMSLS KPPRQTLSSN WDVSSFSIDS VAQSPSRLPS FEELDTTNML LRQRIVFLGS
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE

Arabidopsis Description

CLPP3ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.