Factsheet for Os01t0507900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G197900.1	Wheat	plastid	80.89	82.74
HORVU3Hr1G044530.1	Barley	plastid	80.25	82.62
TraesCS3B01G229600.1	Wheat	plastid	80.57	82.41
Zm00001d009339_P001	Maize	plastid	80.89	81.94
EES00782	Sorghum	plastid	81.21	81.47
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	17.2	79.41
HORVU3Hr1G044510.1	Barley	extracellular	20.7	74.71
VIT_14s0006g01880.t01	Wine grape	plastid	63.06	61.88
KRH70450	Soybean	plastid	61.78	60.81
KRH01676	Soybean	plastid	61.78	60.25
Solyc02g091280.2.1	Tomato	plastid	57.64	58.58
AT1G66670.1	Thale cress	plastid	57.01	57.93
Bra004177.1-P	Field mustard	plastid	57.01	57.19
CDX96137	Canola	plastid	56.69	56.87
CDY36212	Canola	plastid	56.05	56.23
PGSC0003DMT400078756	Potato	plastid	56.05	56.05
Os03t0308100-01	Rice	plastid	33.44	37.23
Os10t0580800-01	Rice	plastid	32.17	34.47
CAA33972	Rice	cytosol	22.93	33.33
Os03t0411500-01	Rice	plastid	25.8	31.27
Os02t0634500-01	Rice	plastid	28.66	30.2
Os04t0525600-01	Rice	mitochondrion	29.3	29.77
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	27.07	28.52
Os06t0136800-01	Rice	plastid	24.52	25.93
Os03t0344900-00	Rice	plastid	21.97	20.23
Os05t0592100-01	Rice	plastid	21.97	17.88

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EntrezGene:4324049	EMBL:AK102473	ProteinID:BAF05069.1	ProteinID:BAS72358.1
InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0009507
GO:GO:0009532	GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009840
GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	HAMAP:MF_00444
EnsemblPlantsGene:Os01g0507900	EnsemblPlants:Os01t0507900-01	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381	ScanProsite:PS00382
PANTHER:PTHR10381	PANTHER:PTHR10381:SF20	UniProt:Q0JMF9	MEROPS:S14.A03	SUPFAM:SSF52096	UniParc:UPI0000DD8B39
RefSeq:XP_015622381.1	RefSeq:XP_015622382.1	SEG:seg	:	:	:

Description

CHLOROPLAST PROTEASE 3Similar to NClpP3 (ATP-dependent Clp protease proteolytic subunit ClpP3). (Os01t0507900-01)

Coordinates

chr1:+:17746363..17752009

Molecular Weight (calculated)

33594.7 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.142

Length

314 amino acids

Sequence
(BLAST)

001: MEAAAAMAAL PASPCSSSSS PSSLFLAPNP CCWKAAPRAT VRASASAARR TLSSAWELPG PSAARPAARK PRLEELDTTN MLLRQRIVFL GSPVDDMSAD
101: LIISQLLLLD AEDKTKDIKL FINSPGGSIT AGMGVYDAMK FCKADISTVC FGLAASMGAF LLAAGTKGKR FCMPNARIMI HQPSGGAGGK VTEMGLQIRE
201: MMYEKIKINK ILSRITGKPE EQIDEDTKFD YFMSPWEAKD YGIVDSVIDE GKPGLVAPLA GAVPPPKSRV WYLWNASGPT RKIMKNLPSE EKLIQNGNGS
301: ASGDDGKFKE ISTA

Best Arabidopsis Sequence Match ( AT1G66670.1 )
(BLAST)

001: MEMSLRLASS STSNPICLLN PGKNLNFPIR NHRIPKTSKP FCVRSSMSLS KPPRQTLSSN WDVSSFSIDS VAQSPSRLPS FEELDTTNML LRQRIVFLGS
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE

Arabidopsis Description

CLPP3ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.