Factsheet for TraesCS3A01G197900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G229600.1	Wheat	plastid	98.05	98.05
HORVU3Hr1G044530.1	Barley	plastid	96.74	97.38
Os01t0507900-01	Rice	plastid	82.74	80.89
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	17.26	77.94
Zm00001d009339_P001	Maize	plastid	78.5	77.74
EES00782	Sorghum	plastid	78.5	77.0
HORVU3Hr1G044510.1	Barley	extracellular	20.2	71.26
VIT_14s0006g01880.t01	Wine grape	plastid	60.26	57.81
KRH70450	Soybean	plastid	58.96	56.74
Solyc02g091280.2.1	Tomato	plastid	57.0	56.63
KRH01676	Soybean	plastid	58.96	56.21
AT1G66670.1	Thale cress	plastid	55.7	55.34
PGSC0003DMT400078756	Potato	plastid	55.05	53.82
Bra004177.1-P	Field mustard	plastid	54.72	53.67
CDX96137	Canola	plastid	54.72	53.67
CDY36212	Canola	plastid	54.4	53.35
TraesCS4A01G121500.1	Wheat	plastid	32.57	35.46
TraesCS1A01G198400.1	Wheat	plastid	33.88	35.14
TraesCS1A01G111400.1	Wheat	cytosol	12.38	33.33
TraesCS6A01G220500.1	Wheat	plastid	28.99	29.67
TraesCS4A01G149900.1	Wheat	plastid	26.38	29.24
TraesCS3A01G215600.1	Wheat	cytosol	15.96	26.63
TraesCS3A01G187300.1	Wheat	plastid	24.43	26.32
TraesCS7A01G076400.1	Wheat	plastid	23.45	24.0
TraesCS4A01G374600.2	Wheat	plastid	22.48	21.84
TraesCS4A01G139700.3	Wheat	plastid	22.15	20.18
TraesCS1A01G437500.2	Wheat	plastid	22.48	17.83

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS
InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF20	SUPFAM:SSF52096	EnsemblPlantsGene:TraesCS3A01G197900
EnsemblPlants:TraesCS3A01G197900.1	TIGR:cd07017	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:-:311982417..312015005

Molecular Weight (calculated)

32969.1 Da

IEP (calculated)

8.911

GRAVY (calculated)

-0.088

Length

307 amino acids

Sequence
(BLAST)

001: MATITAPPCS SSPSCMFLTR SYCCSRSAPR AAIRSSTVAA ARQTLSSGWD LSGLSGARPA ARKARLEELD TSNMLLRQRI IFLGSPVDDL NADLITSQLL
101: LLDAKDHTKD IKLFINSPGG SITAGMGIYD AMKFCKADIS TVCFGLAASM GAFLLAAGTK GKRFCMPNAR IMIHQPSGGA GGKATEMGLQ ITEMLYEKIK
201: INKIMSRITG KPEEQIDEDT KFDCFMSPWE AKDYGIIDSI IDEGKLGLVA PVSGAVPPPK SRVWYLWNAS GPTRKIMKNL PSEEKLIRNG NVSVSGADGM
301: LKEASST

Best Arabidopsis Sequence Match ( AT1G66670.1 )
(BLAST)

001: MEMSLRLASS STSNPICLLN PGKNLNFPIR NHRIPKTSKP FCVRSSMSLS KPPRQTLSSN WDVSSFSIDS VAQSPSRLPS FEELDTTNML LRQRIVFLGS
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE

Arabidopsis Description

CLPP3ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.