Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96137 | Canola | plastid | 97.44 | 97.44 |
| AT1G66670.1 | Thale cress | plastid | 84.34 | 85.44 |
| KRH70450 | Soybean | plastid | 65.18 | 63.95 |
| KRH01676 | Soybean | plastid | 65.18 | 63.35 |
| VIT_14s0006g01880.t01 | Wine grape | plastid | 64.22 | 62.81 |
| HORVU3Hr1G044510.1 | Barley | extracellular | 16.93 | 60.92 |
| Solyc02g091280.2.1 | Tomato | plastid | 58.15 | 58.9 |
| PGSC0003DMT400078756 | Potato | plastid | 58.47 | 58.28 |
| Os01t0507900-01 | Rice | plastid | 56.23 | 56.05 |
| Zm00001d009339_P001 | Maize | plastid | 53.99 | 54.52 |
| TraesCS3B01G229600.1 | Wheat | plastid | 53.35 | 54.4 |
| TraesCS3A01G197900.1 | Wheat | plastid | 53.35 | 54.4 |
| HORVU3Hr1G044530.1 | Barley | plastid | 52.72 | 54.1 |
| EES00782 | Sorghum | plastid | 53.99 | 53.99 |
| GSMUA_Achr4P13550_001 | Banana | plastid | 59.74 | 50.68 |
| CDX69964 | Canola | plastid | 21.09 | 44.0 |
| CDY39425 | Canola | plastid | 33.23 | 36.11 |
| CDY51306 | Canola | plastid | 31.63 | 35.74 |
| CDY38981 | Canola | plastid | 33.23 | 35.74 |
| CDY21523 | Canola | mitochondrion | 26.52 | 34.87 |
| CDX89962 | Canola | plastid | 32.59 | 34.69 |
| CDY02210 | Canola | mitochondrion | 25.88 | 34.47 |
| CDY61915 | Canola | mitochondrion | 25.56 | 33.9 |
| CDY15433 | Canola | plastid | 32.59 | 33.55 |
| CDY15250 | Canola | plastid | 32.27 | 33.01 |
| CDY71709 | Canola | endoplasmic reticulum, extracellular | 19.81 | 32.46 |
| CDY71339 | Canola | endoplasmic reticulum | 12.78 | 31.25 |
| CDY34832 | Canola | plastid | 25.88 | 29.67 |
| CDY21009 | Canola | plastid | 25.24 | 29.26 |
| CDY31211 | Canola | plastid | 24.92 | 28.89 |
| CDY68541 | Canola | cytosol | 11.18 | 28.0 |
| CDY26563 | Canola | plastid | 22.36 | 25.18 |
| CDY30078 | Canola | plastid | 22.36 | 25.09 |
| CDX98066 | Canola | plastid | 22.04 | 24.73 |
| CDY09652 | Canola | plastid | 22.68 | 23.36 |
| CDY69283 | Canola | plastid | 15.65 | 23.33 |
| CDY42955 | Canola | plastid | 22.68 | 23.28 |
| CDY09656 | Canola | plastid | 22.68 | 23.2 |
| CDX90492 | Canola | plastid | 22.68 | 23.13 |
| CDY35605 | Canola | plastid | 22.36 | 23.1 |
| CDX95009 | Canola | plastid | 22.36 | 22.8 |
| CDY32150 | Canola | plastid | 23.32 | 22.46 |
| CDY31112 | Canola | plastid | 23.0 | 22.29 |
| CDY34630 | Canola | plastid | 12.46 | 21.91 |
| CDY46278 | Canola | cytosol | 15.02 | 20.8 |
| CDY43468 | Canola | plastid | 10.22 | 18.18 |
| CDY59367 | Canola | plastid | 21.73 | 17.53 |
| CDY03582 | Canola | plastid | 21.73 | 17.48 |
| CDY15997 | Canola | plastid | 22.04 | 14.14 |
Protein Annotations
| MapMan:19.4.2.9.1 | Gene3D:3.90.226.10 | GO:A0A078HEJ2 | UniProt:A0A078HEJ2 | EnsemblPlants:CDY36212 | ProteinID:CDY36212 |
| ProteinID:CDY36212.1 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | InterPro:ClpP_His_AS | InterPro:ClpP_Ser_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008236 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00060122001 | HAMAP:MF_00444 |
| PFAM:PF00574 | PRINTS:PR00127 | ScanProsite:PS00381 | ScanProsite:PS00382 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF20 |
| MEROPS:S14.010 | SUPFAM:SSF52096 | UniParc:UPI0004EF16EA | SEG:seg | : | : |
Description
BnaC06g27560DATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A078HEJ2]
Coordinates
chrLK032370:-:46023..47920
Molecular Weight (calculated)
34370.1 Da
IEP (calculated)
8.308
GRAVY (calculated)
-0.369
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLNLVSSSS SNHVFLFNPI LSGKQVSLPS RHQRIPKRAK TFCVRSSMNT SGPGPRPRQT LSSNWDVSKF SVDSVAQSPS RLPSFEELDT TNMLLRQRIV
101: FLGSQVDDMT ADLVISQLLL LDAQDSERDI TLFINSPGGS ITAGMGIYDA MKQCKAEVST VCLGLAASMG AFLLASGSKG KRYCMPNSKV MIHQPLGSAG
201: GKATEMSIRV REMMYHKIKL NKIFSRITGK PESEIEGDTD RDYFLNPWEA KEYGLVDTVI DDGKPGLVAP IGDGTPPPNT KVWDFWKVEG TKNDNKDLPT
301: EQSRVQNGYA TPE
101: FLGSQVDDMT ADLVISQLLL LDAQDSERDI TLFINSPGGS ITAGMGIYDA MKQCKAEVST VCLGLAASMG AFLLASGSKG KRYCMPNSKV MIHQPLGSAG
201: GKATEMSIRV REMMYHKIKL NKIFSRITGK PESEIEGDTD RDYFLNPWEA KEYGLVDTVI DDGKPGLVAP IGDGTPPPNT KVWDFWKVEG TKNDNKDLPT
301: EQSRVQNGYA TPE
001: MEMSLRLASS STSNPICLLN PGKNLNFPIR NHRIPKTSKP FCVRSSMSLS KPPRQTLSSN WDVSSFSIDS VAQSPSRLPS FEELDTTNML LRQRIVFLGS
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE
101: QVDDMTADLV ISQLLLLDAE DSERDITLFI NSPGGSITAG MGIYDAMKQC KADVSTVCLG LAASMGAFLL ASGSKGKRYC MPNSKVMIHQ PLGTAGGKAT
201: EMSIRIREMM YHKIKLNKIF SRITGKPESE IESDTDRDNF LNPWEAKEYG LIDAVIDDGK PGLIAPIGDG TPPPKTKVWD LWKVEGTKKD NTNLPSERSM
301: TQNGYAAIE
Arabidopsis Description
CLPP3ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.