CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030504.1-P	Field mustard	plastid	96.75	89.63
CDY15433	Canola	plastid	97.11	88.49
CDX89962	Canola	plastid	92.78	87.42
AT1G02560.1	Thale cress	plastid	93.5	86.91
CDY15250	Canola	plastid	93.86	84.97
VIT_07s0005g01530.t01	Wine grape	plastid	80.51	77.16
Zm00001d047634_P002	Maize	cytosol	65.7	77.12
KRH31786	Soybean	nucleus, plastid	82.31	75.25
KRH69210	Soybean	nucleus, plastid	82.67	73.63
Solyc01g100520.2.1	Tomato	plastid	77.98	72.24
GSMUA_Achr8P22320_001	Banana	plastid	76.17	70.33
EER92371	Sorghum	plastid	69.31	67.84
TraesCS4D01G184400.1	Wheat	plastid	68.95	67.73
TraesCS4A01G121500.1	Wheat	plastid	68.95	67.73
TraesCS4B01G181600.1	Wheat	plastid	68.59	67.38
Os03t0308100-01	Rice	plastid	68.23	67.02
KRH68271	Soybean	plastid	67.87	62.46
HORVU4Hr1G053660.1	Barley	plastid	68.59	62.09
Zm00001d028895_P001	Maize	plastid	68.95	61.02
CDX69964	Canola	plastid	24.19	44.67
CDY61915	Canola	mitochondrion	33.57	39.41
CDY21523	Canola	mitochondrion	33.57	39.08
PGSC0003DMT400007157	Potato	endoplasmic reticulum, plasma membrane	78.34	38.48
CDY02210	Canola	mitochondrion	32.49	38.3
CDY71709	Canola	endoplasmic reticulum, extracellular	23.83	34.55
CDX96137	Canola	plastid	36.82	32.59
CDY38981	Canola	plastid	33.94	32.3
CDY39425	Canola	plastid	33.57	32.29
CDY68541	Canola	cytosol	14.44	32.0
CDY36212	Canola	plastid	35.74	31.63
CDY21009	Canola	plastid	30.69	31.48
CDY31211	Canola	plastid	30.69	31.48
CDY34832	Canola	plastid	30.69	31.14
CDX98066	Canola	plastid	31.05	30.82
CDY26563	Canola	plastid	30.69	30.58
CDY30078	Canola	plastid	30.69	30.47
CDY71339	Canola	endoplasmic reticulum	13.72	29.69
CDY69283	Canola	plastid	20.94	27.62
CDY34630	Canola	plastid	17.69	27.53
CDY35605	Canola	plastid	27.08	24.75
CDY09652	Canola	plastid	27.08	24.67
CDY42955	Canola	plastid	27.08	24.59
CDY09656	Canola	plastid	27.08	24.51
CDX90492	Canola	plastid	27.08	24.43
CDY31112	Canola	plastid	27.44	23.53
CDY32150	Canola	plastid	27.44	23.38
CDX95009	Canola	plastid	24.19	21.82
CDY43468	Canola	plastid	13.0	20.45
CDY46278	Canola	cytosol	15.88	19.47
CDY59367	Canola	plastid	24.91	17.78
CDY03582	Canola	plastid	24.91	17.74
CDY15997	Canola	plastid	30.69	17.42

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	GO:A0A078IMU5	UniProt:A0A078IMU5	EnsemblPlants:CDY51306	ProteinID:CDY51306
ProteinID:CDY51306.1	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00003115001	HAMAP:MF_00444
PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF12
SUPFAM:SSF52096	UniParc:UPI0004EF0929	:	:	:	:

Description

BnaCnng20510DATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A078IMU5]

Coordinates

chrLK032983:-:66468..68398

Molecular Weight (calculated)

30168.0 Da

IEP (calculated)

7.548

GRAVY (calculated)

-0.229

Length

277 amino acids

Sequence
(BLAST)

001: MAHACVSRFT AGFVSNGSSS FDSQKLVSDR KNWKRSSSSV YSGGNLWTPE PPSPQGVWSI RDDLQVPSSP YFPAYAQGQG PPPMVQERFQ SIITQLFQYR
101: IIRCGGAVDD DMANIIVAQL LYLDAVDPTK DIVMYVNSPG GSVTAGMAIF DTMRHIRPDV STVCVGLAAS MGAFLLSAGT KGRKRYSLPN SRIMIHQPLG
201: GAQGGQTDID IQQANEMLHH KANLNGYLAY QTGQSLEKIN QDTDRDFFMS AKEAKDYGLI DAVIMNPLKA LQPLAPA

Best Arabidopsis Sequence Match ( AT1G02560.1 )
(BLAST)

001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Arabidopsis Description

CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.