CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51306	Canola	plastid	62.46	67.87
KRH31786	Soybean	nucleus, plastid	67.77	67.33
KRH69210	Soybean	nucleus, plastid	69.1	66.88
Zm00001d047634_P002	Maize	cytosol	52.16	66.53
VIT_07s0005g01530.t01	Wine grape	plastid	63.79	66.44
Bra033332.1-P	Field mustard	plastid	64.78	66.33
CDX89962	Canola	plastid	64.78	66.33
AT1G02560.1	Thale cress	plastid	65.45	66.11
CDY15250	Canola	plastid	65.78	64.71
Bra030504.1-P	Field mustard	plastid	63.46	63.88
CDY15433	Canola	plastid	63.46	62.83
GSMUA_Achr8P22320_001	Banana	plastid	60.47	60.67
Solyc01g100520.2.1	Tomato	plastid	60.13	60.54
EER92371	Sorghum	plastid	56.15	59.72
Os03t0308100-01	Rice	plastid	55.81	59.57
TraesCS4A01G121500.1	Wheat	plastid	55.81	59.57
TraesCS4D01G184400.1	Wheat	plastid	55.81	59.57
TraesCS4B01G181600.1	Wheat	plastid	55.48	59.22
HORVU4Hr1G053660.1	Barley	plastid	55.81	54.9
Zm00001d028895_P001	Maize	plastid	55.48	53.35
KRH29139	Soybean	mitochondrion, nucleus	30.9	39.08
KRH24178	Soybean	mitochondrion	30.23	38.56
PGSC0003DMT400007157	Potato	endoplasmic reticulum, plasma membrane	61.79	32.98
KRH01676	Soybean	plastid	33.22	31.06
KRH70450	Soybean	plastid	32.89	31.03
KRH29491	Soybean	plastid	26.58	29.3
KRH24490	Soybean	plastid	26.58	29.3
KRH76388	Soybean	nucleus, plastid	27.57	27.12
KRH39679	Soybean	nucleus, plastid	27.24	26.8
KRH57313	Soybean	endoplasmic reticulum, extracellular	25.25	24.36
KRH57519	Soybean	plastid	23.26	23.03
KRH04225	Soybean	plastid	22.92	22.7
KRH04045	Soybean	mitochondrion	24.92	21.87
KRH68514	Soybean	plastid	20.93	19.44
KRG96809	Soybean	plastid	20.6	18.96
KRG91103	Soybean	plastid	19.93	16.13
KRH35674	Soybean	plastid	19.93	16.13

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	EMBL:ACUP02002105	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf
InterPro:ClpP_His_AS	EnsemblPlantsGene:GLYMA_03G220200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	UniProt:K7KGE3	EnsemblPlants:KRH68271
ProteinID:KRH68271	ProteinID:KRH68271.1	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00382	PANTHER:PTHR10381
PANTHER:PTHR10381:SF12	SUPFAM:SSF52096	UniParc:UPI0002962C13	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:42339071..42342908

Molecular Weight (calculated)

32993.7 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.144

Length

301 amino acids

Sequence
(BLAST)

001: MANAPCLRCS SLVLPSLTPT SSSQSLSLAS HTYLPSWKLI GNKYSTKKSL GKVKAVYANE FWAPETSSSQ GIWDDLRVPS SPYFPAYAQG HEPPPMVQER
101: FQSRIIRCGG AVDDDMSNIL VAQLLYLDVL TRFDIVMYVS SPGGSVTAGM AIFDTMRHIR PDVSTVCIGL AASKGAFLLS AGTKGKRYSL PNSRIMIHQP
201: LSGQGGQTDI DIQNRSAFCF CSKWTKLVLS IERKFLLGKP GYLSYHTGQS LEKINQDTDC DFFMKAKEAK EYGFIDGAIM NPLKALQPLP AAVEGKDRDS
301: I

Best Arabidopsis Sequence Match ( AT1G02560.1 )
(BLAST)

001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Arabidopsis Description

CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.