CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04225	Soybean	plastid	94.41	94.41
CDY71709	Canola	endoplasmic reticulum, extracellular	54.93	87.43
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	33.55	78.46
VIT_00s0204g00220.t01	Wine grape	plastid	74.01	77.05
CDY35605	Canola	plastid	73.68	73.93
CDY09652	Canola	plastid	73.36	73.36
AT4G17040.1	Thale cress	plastid	73.36	73.11
CDY42955	Canola	plastid	73.36	73.11
Bra040108.1-P	Field mustard	plastid	73.36	73.11
CDX90492	Canola	plastid	73.68	72.96
CDY09656	Canola	plastid	73.36	72.88
Bra012683.1-P	Field mustard	plastid	73.36	72.64
PGSC0003DMT400067452	Potato	plastid	70.39	70.86
Solyc08g077890.2.1	Tomato	plastid	69.41	69.87
GSMUA_Achr9P24480_001	Banana	plastid	73.03	66.67
VIT_00s0309g00080.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	36.84	66.27
Zm00001d040322_P002	Maize	plastid	61.84	65.05
EES00561	Sorghum	plastid	62.17	64.95
TraesCS3B01G216800.1	Wheat	plastid	60.86	64.91
TraesCS3A01G187300.1	Wheat	plastid	60.53	64.56
VIT_00s0309g00040.t01	Wine grape	endoplasmic reticulum	33.55	64.15
HORVU3Hr1G038610.4	Barley	plastid	58.88	63.03
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	60.86	62.08
TraesCS3D01G191100.2	Wheat	plastid	60.86	59.11
CDY43468	Canola	plastid	28.29	48.86
KRH29139	Soybean	mitochondrion, nucleus	26.64	34.03
KRH24178	Soybean	mitochondrion	25.99	33.47
KRG96809	Soybean	plastid	33.55	31.19
KRH68514	Soybean	plastid	33.22	31.17
KRH29491	Soybean	plastid	25.33	28.21
KRH24490	Soybean	plastid	24.67	27.47
KRH31786	Soybean	nucleus, plastid	27.3	27.39
KRG91103	Soybean	plastid	33.22	27.15
KRH69210	Soybean	nucleus, plastid	27.63	27.01
KRH35674	Soybean	plastid	32.89	26.88
KRH76388	Soybean	nucleus, plastid	25.99	25.82
KRH39679	Soybean	nucleus, plastid	25.99	25.82
KRH57313	Soybean	endoplasmic reticulum, extracellular	24.67	24.04
KRH70450	Soybean	plastid	25.0	23.82
KRH01676	Soybean	plastid	25.0	23.6
KRH68271	Soybean	plastid	23.03	23.26
KRH04045	Soybean	mitochondrion	24.34	21.57

Protein Annotations

EntrezGene:100785827	MapMan:19.4.2.9.2	Gene3D:3.90.226.10	EMBL:ACUP02002850	EMBL:BT093942	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G065900	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
UniProt:I1K0W1	ProteinID:KRH57517.1	ProteinID:KRH57518.1	EnsemblPlants:KRH57519	ProteinID:KRH57519	ProteinID:KRH57519.1
ProteinID:KRH57520.1	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381	PANTHER:PTHR10381:SF25	MEROPS:S14.001
SUPFAM:SSF52096	UniParc:UPI0001B163A6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:6460756..6468689

Molecular Weight (calculated)

33487.2 Da

IEP (calculated)

9.631

GRAVY (calculated)

-0.192

Length

304 amino acids

Sequence
(BLAST)

001: MEVATTASSI ALNKPMLALP SSSRTATPIR AMNSSTSSVR TSLSSNFVAP YTGINSAYSL FSGHKLRLSS LNPGSFRGSN SKRGVVTMVI PFQRGSAWEQ
101: PPPDLASYLY KNRIVYLGMS LVPSVTELIL AEFLYLQYED DDKPIYLYIN STGTTKGGEK LGYETEAFAI YDVMRYVKPP IFTLCVGNAW GEAALLLAAG
201: AKGNRSALPS STIMIRQPIA RFQGQATDVN LARREVNNVK TELVKLYAKH MEKTPEQIEA DIQRPKYFSP SEAVEYGIID KVIYNDRGSE DRGVVSDLKK
301: ARLI

Best Arabidopsis Sequence Match ( AT4G17040.1 )
(BLAST)

001: MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS DLCGAKLRAE SLNPLNFSSS KPKRGVVTMV IPFSKGSAHE
101: QPPPDLASYL FKNRIVYLGM SLVPSVTELI LAEFLYLQYE DEEKPIYLYI NSTGTTKNGE KLGYDTEAFA IYDVMGYVKP PIFTLCVGNA WGEAALLLTA
201: GAKGNRSALP SSTIMIKQPI ARFQGQATDV EIARKEIKHI KTEMVKLYSK HIGKSPEQIE ADMKRPKYFS PTEAVEYGII DKVVYNERGS QDRGVVSDLK
301: KAQLI

Arabidopsis Description

CLPR4ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178V785]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.