CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29491	Soybean	plastid	96.7	96.7
VIT_03s0063g02300.t01	Wine grape	plastid	75.09	76.21
CDY31211	Canola	plastid	71.79	72.59
GSMUA_Achr8P05270_001	Banana	plastid	70.7	72.56
CDY21009	Canola	plastid	71.06	71.85
CDY34832	Canola	plastid	71.79	71.79
PGSC0003DMT400084282	Potato	plastid	72.16	71.64
Bra016816.1-P	Field mustard	plastid	70.7	71.48
Solyc10g051310.1.1	Tomato	plastid	71.43	70.91
Bra031777.1-P	Field mustard	plastid	70.7	70.7
AT1G11750.2	Thale cress	plastid	73.26	69.2
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.68	66.23
Os03t0411500-01	Rice	plastid	57.88	61.0
CDY34630	Canola	plastid	37.36	57.3
TraesCS4D01G157200.1	Wheat	plastid	54.58	56.02
TraesCS4B01G165100.1	Wheat	plastid	54.21	55.64
EES07709	Sorghum	plastid	55.68	55.07
TraesCS4A01G149900.1	Wheat	plastid	54.95	54.15
HORVU4Hr1G038160.2	Barley	plastid	54.21	52.3
KRH24178	Soybean	mitochondrion	28.21	32.63
KRH31786	Soybean	nucleus, plastid	35.9	32.34
KRH29139	Soybean	mitochondrion, nucleus	27.84	31.93
KRH69210	Soybean	nucleus, plastid	35.9	31.51
KRH70450	Soybean	plastid	31.87	27.27
KRH01676	Soybean	plastid	31.87	27.02
KRH39679	Soybean	nucleus, plastid	30.04	26.8
KRH68271	Soybean	plastid	29.3	26.58
KRH76388	Soybean	nucleus, plastid	29.67	26.47
KRH04225	Soybean	plastid	27.84	25.0
KRH57519	Soybean	plastid	27.47	24.67
KRH57313	Soybean	endoplasmic reticulum, extracellular	26.01	22.76
KRG96809	Soybean	plastid	25.64	21.41
KRH04045	Soybean	mitochondrion	26.37	20.99
KRH68514	Soybean	plastid	24.91	20.99
KRG91103	Soybean	plastid	23.08	16.94
KRH35674	Soybean	plastid	22.71	16.67

Protein Annotations

EntrezGene:100796744	MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EMBL:ACUP02007176	InterPro:ClpP	InterPro:ClpP/TepA
InterPro:ClpP/crotonase-like_dom_sf	EnsemblPlantsGene:GLYMA_12G044500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	UniProt:K7LT03	EnsemblPlants:KRH24490
ProteinID:KRH24490	ProteinID:KRH24490.1	ProteinID:KRH24491.1	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
PANTHER:PTHR10381	PANTHER:PTHR10381:SF8	MEROPS:S14.006	SUPFAM:SSF52096	UniParc:UPI000233D325	SEG:seg

Description

hypothetical protein

Coordinates

chr12:+:3230504..3235246

Molecular Weight (calculated)

29404.2 Da

IEP (calculated)

8.466

GRAVY (calculated)

-0.101

Length

273 amino acids

Sequence
(BLAST)

001: MVPQALSVPA SSSLAIASRT RSPSHLVFSQ RNPCSIASSL PNPYGHSSEV GLSSKSRGFP LKHDEKNIHG ASTSYGAIEA KGNPPITPAV MTPGGPLDLT
101: SVLFRNRIIF IGQPVNSQVA QRVISQLVTL ATINENADIL VYINCPGGST YSVLAIYDCM SWIKPKVGTV CFGVAASQGA LLLAGGEKGM RYAMPNARIT
201: IHQPQSGCGG HVEDVRRQVN EAVQSRHKID KMYSVFTGQP LEKVQQYTER DRFLSVSEAL EFGLIDGVLE TEY

Best Arabidopsis Sequence Match ( AT1G11750.2 )
(BLAST)

001: MAGLAISPPL GLSFSSRTRN PKPTSFLSHN QRNPIRRIVS ALQSPYGDSL KAGLSSNVSG SPIKIDNKAP SSLPLPILNI LKSSTVYFIF GVIEAKKGNP
101: PVMPSVMTPG GPLDLSSVLF RNRIIFIGQP INAQVAQRVI SQLVTLASID DKSDILMYLN CPGGSTYSVL AIYDCMSWIK PKVGTVAFGV AASQGALLLA
201: GGEKGMRYAM PNTRVMIHQP QTGCGGHVED VRRQVNEAIE ARQKIDRMYA AFTGQPLEKV QQYTERDRFL SASEALEFGL IDGLLETEY

Arabidopsis Description

CLPP6ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4IAG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.