CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
golgi 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29139	Soybean	mitochondrion, nucleus	96.61	95.8
VIT_01s0011g02100.t01	Wine grape	mitochondrion	83.9	82.16
PGSC0003DMT400027435	Potato	mitochondrion	79.24	78.57
PGSC0003DMT400082481	Potato	mitochondrion	78.39	78.39
CDY02210	Canola	mitochondrion	77.97	78.3
Bra013020.1-P	Field mustard	mitochondrion	77.54	77.87
CDY61915	Canola	mitochondrion	77.54	77.54
Solyc04g009310.2.1	Tomato	plastid	77.54	77.54
CDX69964	Canola	plastid	48.73	76.67
AT5G23140.1	Thale cress	mitochondrion, plastid	77.97	76.35
Bra009331.1-P	Field mustard	mitochondrion	75.42	74.79
CDY21523	Canola	mitochondrion	74.58	73.95
GSMUA_AchrUn_...	Banana	cytosol	56.36	65.52
Zm00001d025891_P001	Maize	mitochondrion	66.95	60.77
Zm00001d002969_P001	Maize	mitochondrion	65.68	59.85
GSMUA_Achr5P10890_001	Banana	plastid	61.44	54.31
TraesCS2B01G393400.1	Wheat	plastid	65.68	52.36
TraesCS2D01G372600.1	Wheat	plastid	66.53	52.33
KXG26753	Sorghum	plastid	66.1	52.0
Zm00001d017330_P001	Maize	plastid	60.59	50.71
Os04t0525600-01	Rice	mitochondrion	65.68	50.16
TraesCS6A01G220500.1	Wheat	plastid	63.14	49.67
TraesCS6B01G262000.1	Wheat	plastid	62.71	49.33
TraesCS6D01G214700.1	Wheat	plastid	61.02	48.65
Zm00001d051203_P001	Maize	plastid	62.29	48.36
Os02t0634500-01	Rice	plastid	60.59	47.99
OQU85365	Sorghum	plastid	62.29	47.57
HORVU2Hr1G090470.1	Barley	plastid	66.1	46.15
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	62.71	34.18
KRH31786	Soybean	nucleus, plastid	43.64	33.99
KRH69210	Soybean	nucleus, plastid	43.64	33.12
KRH68271	Soybean	plastid	38.56	30.23
KRH29491	Soybean	plastid	32.63	28.21
KRH24490	Soybean	plastid	32.63	28.21
KRH01676	Soybean	plastid	37.71	27.64
KRH70450	Soybean	plastid	37.29	27.59
KRH39679	Soybean	nucleus, plastid	33.9	26.14
KRH76388	Soybean	nucleus, plastid	33.9	26.14
KRH57519	Soybean	plastid	33.47	25.99
KRH04225	Soybean	plastid	33.05	25.66
KRH57313	Soybean	endoplasmic reticulum, extracellular	30.93	23.4
KRG96809	Soybean	plastid	30.08	21.71
KRH68514	Soybean	plastid	29.66	21.6
KRH04045	Soybean	mitochondrion	30.93	21.28
KRH35674	Soybean	plastid	26.69	16.94
KRG91103	Soybean	plastid	26.27	16.67

Protein Annotations

EntrezGene:100791303	Gene3D:3.90.226.10	MapMan:35.1	EMBL:ACUP02007172	InterPro:ClpP	InterPro:ClpP/TepA
InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	EnsemblPlantsGene:GLYMA_12G026400	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	UniProt:I1LPJ0	ProteinID:KRH24177.1	EnsemblPlants:KRH24178	ProteinID:KRH24178
ProteinID:KRH24178.1	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381	ScanProsite:PS00382
PANTHER:PTHR10381	PANTHER:PTHR10381:SF40	MEROPS:S14.001	SUPFAM:SSF52096	UniParc:UPI0001BA67F3	SEG:seg

Description

hypothetical protein

Coordinates

chr12:+:1903630..1905558

Molecular Weight (calculated)

25896.1 Da

IEP (calculated)

7.196

GRAVY (calculated)

-0.219

Length

236 amino acids

Sequence
(BLAST)

001: MRGVVKAFAR NLLFHGRNTE CSRSYSLIPM VIEHSSRGER AYDIFSRLLK ERIICINGPI SDDTAHVVVA QLLFLESENP SKPINMYLNS PGGAISAGLA
101: IYDTMQYIRS PVNTICMGQA ASMGSLLLAA GAKGERRSLP NATIMIHQPS GGYSGQAKDI AIHTKHIVRV WDSLNELYSK HTGQSVEVIQ TNMDRDNFMT
201: PQEAKEFGLI DEVIDQRPMA LVSDAVGNEG KDKGSN

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.