Factsheet for TraesCS6B01G262000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G214700.1	Wheat	plastid	98.67	100.0
TraesCS6A01G220500.1	Wheat	plastid	99.67	99.67
Os02t0634500-01	Rice	plastid	85.33	85.91
Zm00001d051203_P001	Maize	plastid	82.33	81.25
Zm00001d017330_P001	Maize	plastid	76.0	80.85
OQU85365	Sorghum	plastid	82.0	79.61
TraesCS2B01G393400.1	Wheat	plastid	71.33	72.3
GSMUA_AchrUn_...	Banana	cytosol	46.33	68.47
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	98.67	68.36
CDX69964	Canola	plastid	32.0	64.0
PGSC0003DMT400082481	Potato	mitochondrion	49.67	63.14
Solyc04g009310.2.1	Tomato	plastid	49.67	63.14
VIT_01s0011g02100.t01	Wine grape	mitochondrion	50.67	63.07
KRH29139	Soybean	mitochondrion, nucleus	50.0	63.03
KRH24178	Soybean	mitochondrion	49.33	62.71
CDY61915	Canola	mitochondrion	49.0	62.29
Bra009331.1-P	Field mustard	mitochondrion	48.33	60.92
CDY21523	Canola	mitochondrion	48.0	60.5
PGSC0003DMT400027435	Potato	mitochondrion	48.0	60.5
GSMUA_Achr5P10890_001	Banana	plastid	53.67	60.3
Bra013020.1-P	Field mustard	mitochondrion	47.0	60.0
AT5G23140.1	Thale cress	mitochondrion, plastid	48.0	59.75
CDY02210	Canola	mitochondrion	46.67	59.57
TraesCS4B01G181600.1	Wheat	plastid	39.33	41.84
TraesCS3B01G187300.1	Wheat	cytosol	21.67	30.09
TraesCS1B01G213300.1	Wheat	plastid	29.0	29.39
TraesCS4B01G165100.1	Wheat	plastid	26.0	29.32
TraesCS3B01G216800.1	Wheat	plastid	27.67	29.12
TraesCS3B01G229600.1	Wheat	plastid	29.67	28.99
TraesCS4B01G154900.3	Wheat	plastid	29.0	25.82
TraesCS1B01G472100.1	Wheat	plastid	22.33	17.4

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS
InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF40	SUPFAM:SSF52096	EnsemblPlantsGene:TraesCS6B01G262000
EnsemblPlants:TraesCS6B01G262000.1	TIGR:cd07017	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:-:471675731..471676867

Molecular Weight (calculated)

32198.6 Da

IEP (calculated)

6.677

GRAVY (calculated)

-0.241

Length

300 amino acids

Sequence
(BLAST)

001: MTPSAVANLA GASPLPAFAP RPRSRPNSAS PGPFGPAPRR LAVAAPPRAF FSSAPYQPPE PEGYSSVREY GLVPMVVETT SRGERAYDIF SRLLKERIVC
101: IHGPIADETA SLVVAQLLFL ESENPLKPIS LYINSPGGVV TAGLAIYDTM QYIRCPVNTI CIGQAASMGS LLLAAGARGE RRALPNARVM IHQPSGGAQG
201: QATDIAIQAK EILKLRDRLN KIYAKHTGQN IDKIEQCMER DLFMDPEEAR EWGLIDEVIE NRPASLMPEG LSAVDPPHHG GGAGANGRGR DRDMEEPSAV

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.