Factsheet for TraesCS4B01G181600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G184400.1	Wheat	plastid	99.29	99.29
TraesCS4A01G121500.1	Wheat	plastid	99.29	99.29
Zm00001d047634_P002	Maize	cytosol	75.89	90.68
HORVU4Hr1G053660.1	Barley	plastid	97.52	89.87
EER92371	Sorghum	plastid	89.72	89.4
Os03t0308100-01	Rice	plastid	88.65	88.65
Zm00001d028895_P001	Maize	plastid	87.23	78.59
Bra033332.1-P	Field mustard	plastid	71.99	69.05
CDX89962	Canola	plastid	71.99	69.05
CDY51306	Canola	plastid	67.38	68.59
AT1G02560.1	Thale cress	plastid	72.34	68.46
VIT_07s0005g01530.t01	Wine grape	plastid	69.15	67.47
Solyc01g100520.2.1	Tomato	plastid	71.28	67.22
GSMUA_Achr8P22320_001	Banana	plastid	71.28	67.0
CDY15250	Canola	plastid	71.63	66.01
KRH31786	Soybean	nucleus, plastid	70.92	66.01
KRH69210	Soybean	nucleus, plastid	72.69	65.92
Bra030504.1-P	Field mustard	plastid	69.5	65.55
CDY15433	Canola	plastid	69.5	64.47
KRH68271	Soybean	plastid	59.22	55.48
TraesCS2B01G393400.1	Wheat	plastid	42.2	40.2
TraesCS6B01G262000.1	Wheat	plastid	41.84	39.33
PGSC0003DMT400007157	Potato	endoplasmic reticulum, plasma membrane	70.92	35.46
TraesCS1B01G213300.1	Wheat	plastid	35.82	34.12
TraesCS3B01G229600.1	Wheat	plastid	35.11	32.25
TraesCS3B01G187300.1	Wheat	cytosol	24.47	31.94
TraesCS4B01G165100.1	Wheat	plastid	27.3	28.95
TraesCS3B01G216800.1	Wheat	plastid	25.89	25.61
TraesCS4B01G154900.3	Wheat	plastid	28.37	23.74
TraesCS1B01G472100.1	Wheat	plastid	25.18	18.44

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS
InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF12	SUPFAM:SSF52096	EnsemblPlantsGene:TraesCS4B01G181600
EnsemblPlants:TraesCS4B01G181600.1	TIGR:cd07017	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:398563218..398566655

Molecular Weight (calculated)

30195.5 Da

IEP (calculated)

8.471

GRAVY (calculated)

-0.147

Length

282 amino acids

Sequence
(BLAST)

001: MATSTASSSS LTAPLLGPKP SPNPPPRSLP LLRNRRCARS VAASAGGGGV GLHGAAHRRG IWSIRDDLLM PRSPYFPVEA AGQERGPSPM VMERFESVVS
101: QLFQHRIIRC GGPVEDDMAN VIVAQLLYLD AVDPNKDIIM YVNSPGGSVT AGMAIFDTMK HIRPDVSTVC IGLAASMGAF LLSGGTKGKR YSLPNSRIMI
201: HQPLGGAQGQ ETDLEIQANE MLHHKANLNG YLAYHTGQPL DKINVDTDRD FFMSAKEAKE YGLIDGVIVN PLKALQPLPA SS

Best Arabidopsis Sequence Match ( AT1G02560.1 )
(BLAST)

001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Arabidopsis Description

CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.