Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030504.1-P | Field mustard | plastid | 98.03 | 99.67 |
| CDY51306 | Canola | plastid | 88.49 | 97.11 |
| AT1G02560.1 | Thale cress | plastid | 90.46 | 92.28 |
| CDX89962 | Canola | plastid | 89.14 | 92.18 |
| CDY15250 | Canola | plastid | 90.46 | 89.87 |
| KRH31786 | Soybean | nucleus, plastid | 77.96 | 78.22 |
| VIT_07s0005g01530.t01 | Wine grape | plastid | 74.34 | 78.2 |
| Zm00001d047634_P002 | Maize | cytosol | 59.54 | 76.69 |
| KRH69210 | Soybean | nucleus, plastid | 76.97 | 75.24 |
| Solyc01g100520.2.1 | Tomato | plastid | 73.36 | 74.58 |
| GSMUA_Achr8P22320_001 | Banana | plastid | 71.38 | 72.33 |
| TraesCS4D01G184400.1 | Wheat | plastid | 65.13 | 70.21 |
| EER92371 | Sorghum | plastid | 65.13 | 69.96 |
| TraesCS4B01G181600.1 | Wheat | plastid | 64.47 | 69.5 |
| TraesCS4A01G121500.1 | Wheat | plastid | 64.47 | 69.5 |
| Os03t0308100-01 | Rice | plastid | 63.82 | 68.79 |
| HORVU4Hr1G053660.1 | Barley | plastid | 64.47 | 64.05 |
| KRH68271 | Soybean | plastid | 62.83 | 63.46 |
| Zm00001d028895_P001 | Maize | plastid | 65.13 | 63.26 |
| CDX69964 | Canola | plastid | 22.04 | 44.67 |
| CDY61915 | Canola | mitochondrion | 31.25 | 40.25 |
| CDY21523 | Canola | mitochondrion | 31.25 | 39.92 |
| PGSC0003DMT400007157 | Potato | endoplasmic reticulum, plasma membrane | 74.01 | 39.89 |
| CDY02210 | Canola | mitochondrion | 30.59 | 39.57 |
| CDY71709 | Canola | endoplasmic reticulum, extracellular | 21.71 | 34.55 |
| CDX96137 | Canola | plastid | 34.54 | 33.55 |
| CDY39425 | Canola | plastid | 31.25 | 32.99 |
| CDY38981 | Canola | plastid | 31.25 | 32.65 |
| CDY36212 | Canola | plastid | 33.55 | 32.59 |
| CDY68541 | Canola | cytosol | 13.16 | 32.0 |
| CDY21009 | Canola | plastid | 28.29 | 31.85 |
| CDY31211 | Canola | plastid | 28.29 | 31.85 |
| CDY26563 | Canola | plastid | 28.95 | 31.65 |
| CDX98066 | Canola | plastid | 28.95 | 31.54 |
| CDY30078 | Canola | plastid | 28.62 | 31.18 |
| CDY34832 | Canola | plastid | 27.96 | 31.14 |
| CDY71339 | Canola | endoplasmic reticulum | 12.5 | 29.69 |
| CDY34630 | Canola | plastid | 16.78 | 28.65 |
| CDY69283 | Canola | plastid | 19.08 | 27.62 |
| CDY09652 | Canola | plastid | 25.0 | 25.0 |
| CDY42955 | Canola | plastid | 25.0 | 24.92 |
| CDY09656 | Canola | plastid | 25.0 | 24.84 |
| CDX90492 | Canola | plastid | 25.0 | 24.76 |
| CDY35605 | Canola | plastid | 24.67 | 24.75 |
| CDY31112 | Canola | plastid | 25.33 | 23.84 |
| CDY32150 | Canola | plastid | 25.33 | 23.69 |
| CDX95009 | Canola | plastid | 22.7 | 22.48 |
| CDY43468 | Canola | plastid | 11.51 | 19.89 |
| CDY46278 | Canola | cytosol | 14.14 | 19.03 |
| CDY59367 | Canola | plastid | 23.36 | 18.3 |
| CDY03582 | Canola | plastid | 23.36 | 18.25 |
| CDY15997 | Canola | plastid | 28.95 | 18.03 |
Protein Annotations
| MapMan:19.4.2.9.1 | Gene3D:3.90.226.10 | GO:A0A078FT02 | UniProt:A0A078FT02 | EnsemblPlants:CDY15433 | ProteinID:CDY15433 |
| ProteinID:CDY15433.1 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | InterPro:ClpP_His_AS | InterPro:ClpP_Ser_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008236 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00089599001 | HAMAP:MF_00444 |
| PFAM:PF00574 | PRINTS:PR00127 | ScanProsite:PS00381 | ScanProsite:PS00382 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF12 |
| SUPFAM:SSF52096 | UniParc:UPI0004EE5B02 | SEG:seg | : | : | : |
Description
BnaA08g27170DATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A078FT02]
Coordinates
chrLK032055:+:20764..23273
Molecular Weight (calculated)
32769.0 Da
IEP (calculated)
8.741
GRAVY (calculated)
-0.235
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHACVSTSS ASSLRITAGF VSNGSSSFDS QKLSLPLPSR KTNKLVSERK NWKRSSSSSS SSSSSTPKAV YSDGNLWTPA PPSPQGVWSI RDDLQVPSSP
101: YFPAYAQGPP PMVQERFQSI ITQLFQYRII RCGGAVDDDM ANIIVAQLLY LDAVDPTKDI VMYVNSPGGS VTAGMAIFDT MRHIRPDVST VCVGLAASMG
201: AFLLSAGTKG KRYSLPNSRI MIHQPLGGAQ GGQTDIDIQQ ANEMLHHKAN LNGYLAYQTG QSLEKINQDT DRDFFMSAKE AKDYGLIDAV IMNPLKALQP
301: LAPA
101: YFPAYAQGPP PMVQERFQSI ITQLFQYRII RCGGAVDDDM ANIIVAQLLY LDAVDPTKDI VMYVNSPGGS VTAGMAIFDT MRHIRPDVST VCVGLAASMG
201: AFLLSAGTKG KRYSLPNSRI MIHQPLGGAQ GGQTDIDIQQ ANEMLHHKAN LNGYLAYQTG QSLEKINQDT DRDFFMSAKE AKDYGLIDAV IMNPLKALQP
301: LAPA
001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA
Arabidopsis Description
CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.