Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G184400.1 | Wheat | plastid | 90.52 | 98.23 |
| TraesCS4B01G181600.1 | Wheat | plastid | 89.87 | 97.52 |
| TraesCS4A01G121500.1 | Wheat | plastid | 89.87 | 97.52 |
| Zm00001d047634_P002 | Maize | cytosol | 69.93 | 90.68 |
| EER92371 | Sorghum | plastid | 83.33 | 90.11 |
| Os03t0308100-01 | Rice | plastid | 82.35 | 89.36 |
| Zm00001d028895_P001 | Maize | plastid | 80.72 | 78.91 |
| Bra033332.1-P | Field mustard | plastid | 66.34 | 69.05 |
| CDX89962 | Canola | plastid | 66.34 | 69.05 |
| CDY51306 | Canola | plastid | 62.09 | 68.59 |
| AT1G02560.1 | Thale cress | plastid | 66.67 | 68.46 |
| Solyc01g100520.2.1 | Tomato | plastid | 66.01 | 67.56 |
| VIT_07s0005g01530.t01 | Wine grape | plastid | 63.73 | 67.47 |
| GSMUA_Achr8P22320_001 | Banana | plastid | 66.01 | 67.33 |
| CDY15250 | Canola | plastid | 66.34 | 66.34 |
| KRH31786 | Soybean | nucleus, plastid | 65.69 | 66.34 |
| KRH69210 | Soybean | nucleus, plastid | 67.32 | 66.24 |
| Bra030504.1-P | Field mustard | plastid | 64.05 | 65.55 |
| CDY15433 | Canola | plastid | 64.05 | 64.47 |
| KRH68271 | Soybean | plastid | 54.9 | 55.81 |
| HORVU3Hr1G044510.1 | Barley | extracellular | 13.73 | 48.28 |
| HORVU3Hr1G083440.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.13 | 40.26 |
| HORVU3Hr1G053800.1 | Barley | endoplasmic reticulum | 16.67 | 36.69 |
| PGSC0003DMT400007157 | Potato | endoplasmic reticulum, plasma membrane | 66.01 | 35.82 |
| HORVU2Hr1G090470.1 | Barley | plastid | 37.91 | 34.32 |
| HORVU3Hr1G044530.1 | Barley | plastid | 33.33 | 33.44 |
| HORVU7Hr1G065830.1 | Barley | cytosol | 22.55 | 31.94 |
| HORVU6Hr1G037220.1 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| HORVU0Hr1G026150.1 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| AGP50779 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| HORVU6Hr1G049380.1 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| HORVU0Hr1G027550.1 | Barley | cytosol | 22.55 | 31.94 |
| HORVU6Hr1G023010.1 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| HORVU5Hr1G065060.1 | Barley | cytosol | 22.55 | 31.94 |
| HORVU0Hr1G037900.1 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| HORVU0Hr1G036940.1 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| HORVU0Hr1G029900.1 | Barley | cytosol, peroxisome, plastid | 22.55 | 31.94 |
| HORVU3Hr1G044750.2 | Barley | cytosol | 13.4 | 29.71 |
| HORVU4Hr1G038160.2 | Barley | plastid | 26.14 | 28.27 |
| HORVU6Hr1G059510.8 | Barley | cytosol, peroxisome | 38.89 | 27.48 |
| HORVU7Hr1G017670.1 | Barley | plastid | 26.14 | 24.84 |
| HORVU3Hr1G038610.4 | Barley | plastid | 22.55 | 24.3 |
| HORVU4Hr1G046480.1 | Barley | plastid | 26.14 | 21.51 |
| HORVU1Hr1G094480.1 | Barley | plastid | 23.86 | 17.22 |
Protein Annotations
| MapMan:19.4.2.9.1 | Gene3D:3.90.226.10 | UniProt:A0A287P2X0 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf |
| InterPro:ClpP_His_AS | InterPro:ClpP_Ser_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008236 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU4Hr1G053660 | EnsemblPlants:HORVU4Hr1G053660.1 | HAMAP:MF_00444 | PFAM:PF00574 | PRINTS:PR00127 | ScanProsite:PS00381 |
| ScanProsite:PS00382 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF12 | SUPFAM:SSF52096 | UniParc:UPI000B4678A1 | SEG:seg |
Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A287P2X0]
Coordinates
chrchr4H:+:446408952..446412739
Molecular Weight (calculated)
32612.5 Da
IEP (calculated)
9.713
GRAVY (calculated)
-0.160
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: APLRPKPPTA SSLLAPPRPA PPMATTTAAS SSSLTAPLLG PKPSPNPAPR SLPLLRSQRR ARSVAAYAAG GGGVGLHGAA HRRGIWSIRD DLLMPRSPYF
101: PVEAAGQERG PSPMVMERFQ SVVSQLFQHR IIRCGGPVED DMANVIVAQL LYLDAVDPNK DIIMYVNSPG GSVTAGMAIF DTMKHIRPDV STVCIGLAAS
201: MGAFLLSGGT KGKRYSLPNS RIMIHQPLGG AQGQETDLEI QANEMLHHKA NLNGYLAYHT GQPLDKINVD TDRDFFMSAK EAKEYGLIDG VIVNPLKALQ
301: PLPASS
101: PVEAAGQERG PSPMVMERFQ SVVSQLFQHR IIRCGGPVED DMANVIVAQL LYLDAVDPNK DIIMYVNSPG GSVTAGMAIF DTMKHIRPDV STVCIGLAAS
201: MGAFLLSGGT KGKRYSLPNS RIMIHQPLGG AQGQETDLEI QANEMLHHKA NLNGYLAYHT GQPLDKINVD TDRDFFMSAK EAKEYGLIDG VIVNPLKALQ
301: PLPASS
001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA
Arabidopsis Description
CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.