Factsheet for HORVU4Hr1G046480.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G167900.1	Wheat	golgi, plastid	90.05	99.41
TraesCS4A01G139700.3	Wheat	plastid	89.78	99.11
TraesCS4B01G154900.3	Wheat	plastid	89.78	99.11
Zm00001d029121_P005	Maize	plastid	80.38	88.2
OQU92609	Sorghum	plastid	80.11	87.91
Os03t0344900-00	Rice	plastid	77.69	84.75
CDY71339	Canola	endoplasmic reticulum	23.12	67.19
VIT_14s0060g02160.t01	Wine grape	plastid	56.45	65.22
KRG96809	Soybean	plastid	54.3	61.77
KRH68514	Soybean	plastid	53.76	61.73
CDY31112	Canola	plastid	53.23	61.3
Bra030756.1-P	Field mustard	plastid	53.23	61.3
GSMUA_Achr3P08150_001	Banana	plastid	55.11	60.83
CDY32150	Canola	plastid	52.69	60.31
Solyc01g099690.2.1	Tomato	plastid	50.81	57.98
CDX95009	Canola	plastid	46.51	56.35
AT1G09130.3	Thale cress	plastid	52.69	52.97
HORVU3Hr1G038610.4	Barley	plastid	27.15	35.56
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.99	33.77
HORVU3Hr1G044510.1	Barley	extracellular	7.53	32.18
HORVU4Hr1G053660.1	Barley	plastid	21.51	26.14
HORVU2Hr1G090470.1	Barley	plastid	22.85	25.15
HORVU3Hr1G053800.1	Barley	endoplasmic reticulum	9.14	24.46
HORVU3Hr1G044530.1	Barley	plastid	19.09	23.28
HORVU0Hr1G029900.1	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU0Hr1G036940.1	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU0Hr1G037900.1	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU7Hr1G065830.1	Barley	cytosol	13.17	22.69
HORVU0Hr1G027550.1	Barley	cytosol	13.17	22.69
HORVU0Hr1G026150.1	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU6Hr1G049380.1	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU6Hr1G037220.1	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU6Hr1G023010.1	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU5Hr1G065060.1	Barley	cytosol	13.17	22.69
AGP50779	Barley	cytosol, peroxisome, plastid	13.17	22.69
HORVU1Hr1G094480.1	Barley	plastid	25.81	22.64
HORVU3Hr1G044750.2	Barley	cytosol	8.33	22.46
HORVU4Hr1G038160.2	Barley	plastid	16.67	21.91
HORVU7Hr1G017670.1	Barley	plastid	18.28	21.12
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	24.19	20.79

Protein Annotations

MapMan:19.4.2.9.2	Gene3D:3.90.226.10	UniProt:A0A287NY73	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009532	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009941	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G046480	EnsemblPlants:HORVU4Hr1G046480.1	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381
PANTHER:PTHR10381:SF6	SUPFAM:SSF52096	UniParc:UPI000B46A3DD	SEG:seg	:	:

Description

ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A287NY73]

Coordinates

chrchr4H:+:370663386..370670226

Molecular Weight (calculated)

40377.8 Da

IEP (calculated)

10.012

GRAVY (calculated)

-0.296

Length

372 amino acids

Sequence
(BLAST)

001: QSSGVRRQLQ PNYPHTHHSP SSLARRGRVT PPPGTMASSF LSLRLPTPSP PTATSSPFFP NPLARSGRCS PPSSTLVARV AGSAAGAPSP LFNPRGDPFL
101: STLAAASPEQ LAAAAGGERR GEDHLPFLEI FQNAKLMSSP AQVERSSSSY SQHSPRRPPP DLPSLLLHGR IVYIGMPLVP AVTELIVAQL MYLDWMNSSE
201: PAYIYINSTG TARDDGEPVG METEGFAIYD AMMRMKTEVH TLCIGAAAGH ACLVLAAGKK GKRYMFPHAK ALIQQPRIPS YGMMQASDVV IRAKEVVHNR
301: NTLVKLLARH TGNPPEKIDK VMRGPFYMDS LKAKEFGVID KILWRGQEKY MSDMLSPEDW DKVAGVRGPG GM

Best Arabidopsis Sequence Match ( AT1G09130.1 )
(BLAST)

001: MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSVV

Arabidopsis Description

ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4HZE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.