Factsheet for HORVU5Hr1G065060.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G094480.1
HORVU3Hr1G038610.4
HORVU3Hr1G044510.1
HORVU3Hr1G044530.1
HORVU4Hr1G053660.1
HORVU4Hr1G063150.3
HORVU7Hr1G017670.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATCG00670.1	HORVU4Hr1G053660.1	AT1G02560.1	14593120
ATCG00670.1	HORVU7Hr1G017670.1	AT1G12410.1	14593120
ATCG00670.1	HORVU1Hr1G094480.1	AT1G49970.1	14593120
ATCG00670.1	HORVU3Hr1G044510.1	AT1G66670.1	14593120
ATCG00670.1	HORVU3Hr1G044530.1	AT1G66670.1	14593120
ATCG00670.1	HORVU4Hr1G063150.3	AT4G12060.1	14593120
ATCG00670.1	HORVU3Hr1G038610.4	AT4G17040.1	14593120
ATCG00670.1	HORVU4Hr1G063150.3	AT4G25370.1	14593120

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G065830.1	Barley	cytosol	100.0	100.0
HORVU0Hr1G027550.1	Barley	cytosol	100.0	100.0
AGP50779	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU6Hr1G023010.1	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU6Hr1G037220.1	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU6Hr1G049380.1	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU0Hr1G037900.1	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU0Hr1G036940.1	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU0Hr1G029900.1	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU0Hr1G026150.1	Barley	cytosol, peroxisome, plastid	98.61	98.61
HORVU3Hr1G053800.1	Barley	endoplasmic reticulum	62.96	97.84
TraesCS3B01G187300.1	Wheat	cytosol	97.69	97.69
GRMZM5G804708_P01	Maize	plastid	97.69	97.69
CAA33972	Rice	cytosol	95.83	95.83
TraesCS1D01G182500.1	Wheat	cytosol, peroxisome, plastid	80.09	95.58
HORVU3Hr1G044750.2	Barley	cytosol	56.48	88.41
PGSC0003DMT400055547	Potato	cytosol	21.76	68.12
ATCG00670.1	Thale cress	cytosol	61.11	67.35
PGSC0003DMT400013567	Potato	cytosol, endoplasmic reticulum, mitochondrion	30.56	62.86
Solyc01g007490.2.1	Tomato	plastid	57.87	60.68
Solyc09g065790.1.1	Tomato	cytosol	31.02	38.07
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.43	37.66
HORVU3Hr1G044510.1	Barley	extracellular	12.5	31.03
HORVU4Hr1G038160.2	Barley	plastid	31.48	24.03
HORVU3Hr1G044530.1	Barley	plastid	33.33	23.61
HORVU4Hr1G053660.1	Barley	plastid	31.94	22.55
HORVU7Hr1G017670.1	Barley	plastid	33.33	22.36
HORVU2Hr1G090470.1	Barley	plastid	29.63	18.93
HORVU3Hr1G038610.4	Barley	plastid	23.61	17.96
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	31.02	15.47
HORVU4Hr1G046480.1	Barley	plastid	22.69	13.17
HORVU1Hr1G094480.1	Barley	plastid	23.15	11.79

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	UniProt:A0A287E9L7	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf
InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:HORVU5Hr1G065060	EnsemblPlants:HORVU5Hr1G065060.1	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381
ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF19	SUPFAM:SSF52096	UniParc:UPI000B478EB1	:

Description

ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A287E9L7]

Coordinates

chrchr5H:+:498739308..498739958

Molecular Weight (calculated)

24695.9 Da

IEP (calculated)

4.425

GRAVY (calculated)

0.067

Length

216 amino acids

Sequence
(BLAST)

001: MPIGVPKVPY RIPGDEEATW VDLYNVMYRE RTLFLGQEIR CEITNHITGL MVYLSIEDGI SDIFLFINSP GGWLISGIAI FDTMQTVTPD IYTICLGIAA
101: SMASFILLGG EPTKRIAFPH ARIMLHQPAS AYYQARTPEF LLEVEELHKV REMITRVYAL RTGKPFWVVS EDMERDVFMS ADEAKAYGLV DIVGDEMIDK
201: HCDTDPVWFP EMFKDW

Best Arabidopsis Sequence Match ( ATCG00670.1 )
(BLAST)

001: MPIGVPKVPF RSPGEGDTSW VDIYNRLYRE RLFFLGQEVD TEISNQLISL MIYLSIEKDT KDLYLFINSP GGWVISGMAI YDTMQFVRPD VQTICMGLAA
101: SIASFILVGG AITKRIAFPH ARVMIHQPAS SFYEAQTGEF ILEAEELLKL RETITRVYVQ RTGKPIWVIS EDMERDVFMS ATEAQAHGIV DLVAVQ

Arabidopsis Description

CLPP1plastid-encoded CLP P [Source:TAIR;Acc:ATCG00670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.