Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G472100.1 | Wheat | plastid | 85.85 | 94.55 |
| TraesCS1D01G445300.1 | Wheat | plastid | 86.56 | 94.34 |
| TraesCS1A01G437500.2 | Wheat | plastid | 85.85 | 94.06 |
| EES20050 | Sorghum | plastid | 79.48 | 86.86 |
| Os05t0592100-01 | Rice | plastid | 79.01 | 86.79 |
| Zm00001d039167_P001 | Maize | plastid | 78.77 | 86.08 |
| KRH35674 | Soybean | plastid | 47.88 | 54.57 |
| KRG91103 | Soybean | plastid | 47.88 | 54.57 |
| GSMUA_Achr2P08390_001 | Banana | plastid | 50.24 | 53.52 |
| VIT_03s0091g00700.t01 | Wine grape | plastid | 48.11 | 52.58 |
| AT1G49970.1 | Thale cress | plastid | 47.88 | 52.45 |
| CDY03582 | Canola | plastid | 47.64 | 51.93 |
| Bra014229.1-P | Field mustard | plastid | 47.41 | 51.8 |
| CDY59367 | Canola | plastid | 47.41 | 51.8 |
| CDY46278 | Canola | cytosol | 27.59 | 51.77 |
| PGSC0003DMT400065220 | Potato | plastid | 47.64 | 51.4 |
| Solyc10g049710.1.1 | Tomato | plastid | 46.46 | 51.3 |
| HORVU3Hr1G038610.4 | Barley | plastid | 20.99 | 31.34 |
| HORVU4Hr1G046480.1 | Barley | plastid | 22.64 | 25.81 |
| HORVU3Hr1G044750.2 | Barley | cytosol | 8.25 | 25.36 |
| HORVU3Hr1G044510.1 | Barley | extracellular | 5.19 | 25.29 |
| HORVU4Hr1G053660.1 | Barley | plastid | 17.22 | 23.86 |
| HORVU3Hr1G083440.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 4.25 | 23.38 |
| HORVU7Hr1G017670.1 | Barley | plastid | 17.69 | 23.29 |
| AGP50779 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU0Hr1G026150.1 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU0Hr1G027550.1 | Barley | cytosol | 11.79 | 23.15 |
| HORVU0Hr1G029900.1 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU6Hr1G037220.1 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU7Hr1G065830.1 | Barley | cytosol | 11.79 | 23.15 |
| HORVU6Hr1G049380.1 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU0Hr1G036940.1 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU6Hr1G023010.1 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU5Hr1G065060.1 | Barley | cytosol | 11.79 | 23.15 |
| HORVU0Hr1G037900.1 | Barley | cytosol, peroxisome, plastid | 11.79 | 23.15 |
| HORVU3Hr1G044530.1 | Barley | plastid | 16.27 | 22.62 |
| HORVU3Hr1G053800.1 | Barley | endoplasmic reticulum | 7.31 | 22.3 |
| HORVU2Hr1G090470.1 | Barley | plastid | 16.27 | 20.41 |
| HORVU4Hr1G038160.2 | Barley | plastid | 12.97 | 19.43 |
| HORVU6Hr1G059510.8 | Barley | cytosol, peroxisome | 18.4 | 18.01 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G094480.1 | EnsemblPlantsGene:HORVU1Hr1G094480 | Gene3D:3.90.226.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:ClpP |
| InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF18 | PFAM:PF00574 | PRINTS:PR00127 |
| SEG:seg | SUPFAM:SSF52096 | UniParc:UPI000B4784BB | UniProt:A0A287GTJ4 | MapMan:19.4.2.9.2 | : |
Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A287GTJ4]
Coordinates
chrchr1H:-:555426371..555431167
Molecular Weight (calculated)
46914.2 Da
IEP (calculated)
9.703
GRAVY (calculated)
-0.529
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: SPAANLPRRA ADRKSHTPPH PTKLPHPLQL SEPPSPSAMA LALRCPAAAS PARAPFPNSS SHYHPQSAAR LPRRPVGGCR CQYNHGDGPP RSFDHIPKQF
101: REENLKDGLM DNYKNVPQFL YGLSPSQMEM FMTDNNPYNR LSQKVTEESI SALRSYDEFG MYSLSGTHEG PTSYNMGMGM PSMSMGRAGK GYRRMRSSAP
201: DLPSLLLDSR IIFLGMPIVP AVTELIAAQF LWLDYDDRTK PIYLYINSTG TMDENNELVA SETDAYAIAD FINRSKAKVY TINLSMAYGQ AAMLLSLGMK
301: GKRGVLPNSI TKLHLPKVHK SGGAAIDMWI KAKELETNTD YYLELVSKGV GKPKEELAEF LRGPRYFRAQ EAIDYGLADT ILHSLDGSFK QKDLTSQLAK
401: AQEMRQSGKR APAGAGRWST PAPR
101: REENLKDGLM DNYKNVPQFL YGLSPSQMEM FMTDNNPYNR LSQKVTEESI SALRSYDEFG MYSLSGTHEG PTSYNMGMGM PSMSMGRAGK GYRRMRSSAP
201: DLPSLLLDSR IIFLGMPIVP AVTELIAAQF LWLDYDDRTK PIYLYINSTG TMDENNELVA SETDAYAIAD FINRSKAKVY TINLSMAYGQ AAMLLSLGMK
301: GKRGVLPNSI TKLHLPKVHK SGGAAIDMWI KAKELETNTD YYLELVSKGV GKPKEELAEF LRGPRYFRAQ EAIDYGLADT ILHSLDGSFK QKDLTSQLAK
401: AQEMRQSGKR APAGAGRWST PAPR
001: MATALVSPLT SQLNHEAVCS KFVLPKSPFM SGSKLFSSNM PCSTVPRRTR RSHCFASAKD MSFDHIPKQF RGDNLKDGVM QNFKNVPQYF YGLNSAQMDM
101: FMTEDSPVRR QAEKVTEESI SSRNNYLNNG GIWSMSGMNA ADARRYSMSV QMYRGGGGGG GSERPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPTK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKSKEQINED IKRPKYLQAQ AAIDYGIADK IADSQDSSFE KRDYDGTLAQ RAMRPGGGSP AAPAGLR
101: FMTEDSPVRR QAEKVTEESI SSRNNYLNNG GIWSMSGMNA ADARRYSMSV QMYRGGGGGG GSERPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPTK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKSKEQINED IKRPKYLQAQ AAIDYGIADK IADSQDSSFE KRDYDGTLAQ RAMRPGGGSP AAPAGLR
Arabidopsis Description
CLPR1ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.