Factsheet for GSMUA_Achr2P08390_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35674	Soybean	plastid	70.85	75.81
KRG91103	Soybean	plastid	70.35	75.27
VIT_03s0091g00700.t01	Wine grape	plastid	72.61	74.48
CDY46278	Canola	cytosol	38.94	68.58
AT1G49970.1	Thale cress	plastid	65.58	67.44
Bra014229.1-P	Field mustard	plastid	65.08	66.75
CDY59367	Canola	plastid	65.08	66.75
CDY03582	Canola	plastid	65.08	66.58
PGSC0003DMT400065220	Potato	plastid	64.57	65.39
Solyc10g049710.1.1	Tomato	plastid	62.56	64.84
EES20050	Sorghum	plastid	56.28	57.73
Os05t0592100-01	Rice	plastid	55.28	56.99
Zm00001d039167_P001	Maize	plastid	55.28	56.7
TraesCS1A01G437500.2	Wheat	plastid	54.27	55.81
TraesCS1B01G472100.1	Wheat	plastid	53.77	55.58
TraesCS1D01G445300.1	Wheat	plastid	53.77	55.01
HORVU1Hr1G094480.1	Barley	plastid	53.52	50.24
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	6.53	38.24
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	11.31	34.62
GSMUA_Achr8P14970_001	Banana	mitochondrion	20.6	33.47
GSMUA_Achr3P08150_001	Banana	plastid	27.89	32.94
GSMUA_Achr9P24480_001	Banana	plastid	24.62	29.43
GSMUA_Achr6P01290_001	Banana	extracellular, peroxisome, plastid	15.08	27.27
GSMUA_AchrUn_...	Banana	cytosol	13.82	27.09
GSMUA_Achr1P08260_001	Banana	plastid	19.35	26.83
GSMUA_Achr5P10890_001	Banana	plastid	17.34	25.84
GSMUA_Achr8P05270_001	Banana	plastid	15.58	23.31
GSMUA_Achr8P22320_001	Banana	plastid	16.83	22.33
GSMUA_Achr4P13550_001	Banana	plastid	18.84	20.33

Protein Annotations

MapMan:19.4.2.9.2	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004252	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006364	GO:GO:0006396
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009532	GO:GO:0009534
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009840	GO:GO:0009941
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr2G08390_001	EnsemblPlants:GSMUA_Achr2P08390_001
EnsemblPlants:GSMUA_Achr2T08390_001	UniProt:M0S680	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381	PANTHER:PTHR10381:SF18
SUPFAM:SSF52096	UniParc:UPI0002957469	SEG:seg	:	:	:

Description

ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G08390_001]

Coordinates

chr2:-:12382122..12386267

Molecular Weight (calculated)

43762.4 Da

IEP (calculated)

9.670

GRAVY (calculated)

-0.429

Length

398 amino acids

Sequence
(BLAST)

001: MAVALRPLSI SSPFDDVSLA PGRGASRELG LRSGVPKSSF LAPFKLSARS PHSLATASRK KAAWRCESRS SGSYEHIPKQ FREENLKKGL MDNYKNIPKH
101: LYGLTASQMD MFMTEDNPVR RQAEKVTEES ISSARNYLDN GGMYSLTGIN DGPSKYSMSV SMYRGGARGY GRPRSAPPDL PSLLLDARIV YLGMPIVPAV
201: TELLVAQLMW LDYDNPSKPI YLYINSPGTQ NENKETVASE TEAYAIADMM AYCKSKVYTV NCGMAYGQAA MLLSLGAKGY RALQPNASTK LYLPKVNKSS
301: GAAIDMWIKA KELDANTDYY IELLAKGIGK PKEEISKDIQ RPKYFQAQDA IAYGIADKII DSRDAAFEKR NYDEMLAQSK AMRRAAGAGP QAAPSGFR

Best Arabidopsis Sequence Match ( AT1G49970.1 )
(BLAST)

001: MATALVSPLT SQLNHEAVCS KFVLPKSPFM SGSKLFSSNM PCSTVPRRTR RSHCFASAKD MSFDHIPKQF RGDNLKDGVM QNFKNVPQYF YGLNSAQMDM
101: FMTEDSPVRR QAEKVTEESI SSRNNYLNNG GIWSMSGMNA ADARRYSMSV QMYRGGGGGG GSERPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPTK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKSKEQINED IKRPKYLQAQ AAIDYGIADK IADSQDSSFE KRDYDGTLAQ RAMRPGGGSP AAPAGLR

Arabidopsis Description

CLPR1ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.