Factsheet for GSMUA_Achr3P08150_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71339	Canola	endoplasmic reticulum	29.08	76.56
VIT_14s0060g02160.t01	Wine grape	plastid	72.7	76.09
Solyc01g099690.2.1	Tomato	plastid	68.55	70.86
KRH68514	Soybean	plastid	67.66	70.37
KRG96809	Soybean	plastid	67.36	69.42
Bra030756.1-P	Field mustard	plastid	64.99	67.8
CDY31112	Canola	plastid	64.99	67.8
CDY32150	Canola	plastid	64.69	67.08
CDX95009	Canola	plastid	56.38	61.89
TraesCS4B01G154900.3	Wheat	plastid	60.83	60.83
TraesCS4A01G139700.3	Wheat	plastid	60.83	60.83
Zm00001d029121_P005	Maize	plastid	61.13	60.77
OQU92609	Sorghum	plastid	61.13	60.77
Os03t0344900-00	Rice	plastid	61.42	60.7
TraesCS4D01G167900.1	Wheat	golgi, plastid	60.53	60.53
AT1G09130.3	Thale cress	plastid	66.17	60.27
HORVU4Hr1G046480.1	Barley	plastid	60.83	55.11
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	18.4	47.69
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	8.31	41.18
GSMUA_Achr8P14970_001	Banana	mitochondrion	27.3	37.55
GSMUA_Achr9P24480_001	Banana	plastid	32.34	32.73
GSMUA_Achr6P01290_001	Banana	extracellular, peroxisome, plastid	19.29	29.55
GSMUA_Achr8P05270_001	Banana	plastid	22.85	28.95
GSMUA_AchrUn_...	Banana	cytosol	17.21	28.57
GSMUA_Achr2P08390_001	Banana	plastid	32.94	27.89
GSMUA_Achr5P10890_001	Banana	plastid	21.07	26.59
GSMUA_Achr1P08260_001	Banana	plastid	21.96	25.78
GSMUA_Achr8P22320_001	Banana	plastid	20.77	23.33
GSMUA_Achr4P13550_001	Banana	plastid	22.55	20.6

Protein Annotations

MapMan:19.4.2.9.2	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009532
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009941	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr3G08150_001	EnsemblPlants:GSMUA_Achr3P08150_001	EnsemblPlants:GSMUA_Achr3T08150_001	UniProt:M0SCT2	PFAM:PF00574	PRINTS:PR00127
PANTHER:PTHR10381	PANTHER:PTHR10381:SF6	SUPFAM:SSF52096	UniParc:UPI000294913F	SEG:seg	:

Description

ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G08150_001]

Coordinates

chr3:-:5760788..5772911

Molecular Weight (calculated)

36423.3 Da

IEP (calculated)

8.625

GRAVY (calculated)

-0.053

Length

337 amino acids

Sequence
(BLAST)

001: MACGAVTFPP LSPRMPMAFA PSGFSSSSSS SSSSPFFSAA AAPLRIRAAS TAALPVPPLN PRDPFLSKLA SAAAAAPDPF ALASSPDPDS PPYLHLFDSP
101: KLMATPAQVE RSVSYNEHRP RKPPPDLPSL LLHGRIVYIG MPLVPVVTEL VIAELLYLQW MDPKQPIYLY INSTGTTRDD GETVAMETEG FAIYDAMMQL
201: KNEIETVAVG AAIGQACLLL AAGKKGRRFM MPHSKAMIQQ PRVPSSGQMP ASDVIIRAKE VVTNKDTLVK LLAKHTGNSV DTVSKVMQRP FYMDSIKAKE
301: FGVIDKILWR GQEKMMADAL SPEEWDRQAG IKVADGL

Best Arabidopsis Sequence Match ( AT1G09130.3 )
(BLAST)

001: MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSAS WRRTNRLTKI TLAADCLVSN HLVNVNMRLG ESYLKDLEIL

Arabidopsis Description

ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4HZE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.