Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
22065420
plastid: 23198870 |
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU92609 | Sorghum | plastid | 94.69 | 94.69 |
Os03t0344900-00 | Rice | plastid | 92.04 | 91.5 |
TraesCS4B01G154900.3 | Wheat | plastid | 88.5 | 89.02 |
TraesCS4D01G167900.1 | Wheat | golgi, plastid | 87.91 | 88.43 |
TraesCS4A01G139700.3 | Wheat | plastid | 87.91 | 88.43 |
HORVU4Hr1G046480.1 | Barley | plastid | 88.2 | 80.38 |
CDY71339 | Canola | endoplasmic reticulum | 25.96 | 68.75 |
VIT_14s0060g02160.t01 | Wine grape | plastid | 63.13 | 66.46 |
KRG96809 | Soybean | plastid | 60.77 | 63.0 |
KRH68514 | Soybean | plastid | 59.88 | 62.65 |
Bra030756.1-P | Field mustard | plastid | 59.0 | 61.92 |
CDY31112 | Canola | plastid | 59.0 | 61.92 |
GSMUA_Achr3P08150_001 | Banana | plastid | 60.77 | 61.13 |
CDY32150 | Canola | plastid | 58.41 | 60.92 |
Solyc01g099690.2.1 | Tomato | plastid | 56.93 | 59.2 |
CDX95009 | Canola | plastid | 51.03 | 56.35 |
AT1G09130.3 | Thale cress | plastid | 57.82 | 52.97 |
Zm00001d040322_P002 | Maize | plastid | 30.68 | 35.99 |
Zm00001d025891_P001 | Maize | mitochondrion | 25.66 | 33.46 |
Zm00001d002969_P001 | Maize | mitochondrion | 24.78 | 32.43 |
Zm00001d017330_P001 | Maize | plastid | 25.07 | 30.14 |
Zm00001d047634_P002 | Maize | cytosol | 20.94 | 30.08 |
Zm00001d051203_P001 | Maize | plastid | 25.66 | 28.62 |
Zm00001d039167_P001 | Maize | plastid | 27.43 | 23.97 |
Zm00001d028895_P001 | Maize | plastid | 21.83 | 23.64 |
GRMZM5G804708_P01 | Maize | plastid | 14.75 | 23.15 |
Zm00001d030149_P001 | Maize | mitochondrion | 20.35 | 21.7 |
Zm00001d009339_P001 | Maize | plastid | 18.88 | 20.65 |
Zm00001d045430_P002 | Maize | plastid | 18.29 | 19.14 |
Protein Annotations
EntrezGene:100282645 | MapMan:19.4.2.9.2 | Gene3D:3.90.226.10 | UniProt:B6T9T4 | InterPro:ClpP | InterPro:ClpP/TepA |
InterPro:ClpP/crotonase-like_dom_sf | EMBL:EU961749 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006508 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009507 | GO:GO:0009532 | GO:GO:0009536 | GO:GO:0009570 |
GO:GO:0009579 | GO:GO:0009941 | GO:GO:0016787 | GO:GO:0019538 | ProteinID:ONL97979.1 | PFAM:PF00574 |
PRINTS:PR00127 | PANTHER:PTHR10381 | PANTHER:PTHR10381:SF6 | SUPFAM:SSF52096 | UniParc:UPI000182C8A2 | EnsemblPlantsGene:Zm00001d029121 |
EnsemblPlants:Zm00001d029121_P005 | EnsemblPlants:Zm00001d029121_T005 | SEG:seg | : | : | : |
Description
ATP-dependent Clp protease proteolytic subunit
Coordinates
chr1:-:58944824..58953954
Molecular Weight (calculated)
36995.0 Da
IEP (calculated)
9.580
GRAVY (calculated)
-0.180
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSASTFLSL RLPTPSHATS SLSFPPSLLR QARGGVASST LVARAAGPTG AAGAPSPLFN PRGDPFLSTL AAASPEDLAA AAGGERRGED HLPFLEIFQN
101: TKLMASPAQV ERSSSSYSQH RPRRPPPDLP SLLLHGRIVY IGMPLVPAVT ELIVAQLMYL EWMNSKEPVY IYINSTGTAR DDGEPVGMES EGFAIYDAMM
201: RMKTEIHTLC IGAAAGHACL VLAAGKKGKR YMFPHAKAMI QQPRIPSYGM MQASDVVIRA KEVVHNRNTL VKLLARHTGN PPEKIDKVMR GPFYMDSLKA
301: KEFGVIDKIL WRGQEKYMAD MLSPDEWDKV AGVRHPDLM
101: TKLMASPAQV ERSSSSYSQH RPRRPPPDLP SLLLHGRIVY IGMPLVPAVT ELIVAQLMYL EWMNSKEPVY IYINSTGTAR DDGEPVGMES EGFAIYDAMM
201: RMKTEIHTLC IGAAAGHACL VLAAGKKGKR YMFPHAKAMI QQPRIPSYGM MQASDVVIRA KEVVHNRNTL VKLLARHTGN PPEKIDKVMR GPFYMDSLKA
301: KEFGVIDKIL WRGQEKYMAD MLSPDEWDKV AGVRHPDLM
001: MASCLQASMN SLLPRSSSFS PHPPLSSNSS GRRNLKTFRY AFRAKASAKI PMPPINPKDP FLSTLASIAA NSPEKLLNRP VNADVPPYLD IFDSPQLMSS
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSVV
101: PAQVERSVAY NEHRPRTPPP DLPSMLLDGR IVYIGMPLVP AVTELVVAEL MYLQWLDPKE PIYIYINSTG TTRDDGETVG MESEGFAIYD SLMQLKNEVH
201: TVCVGAAIGQ ACLLLSAGTK GKRFMMPHAK AMIQQPRVPS SGLMPASDVL IRAKEVITNR DILVELLSKH TGNSVETVAN VMRRPYYMDA PKAKEFGVID
301: RILWRGQEKI IADVVPSEEF DKNAGIKSVV
Arabidopsis Description
ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4HZE0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.