Factsheet for Zm00001d047634_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0308100-01	Rice	plastid	93.64	78.37
TraesCS4D01G184400.1	Wheat	plastid	91.1	76.24
TraesCS4A01G121500.1	Wheat	plastid	91.1	76.24
TraesCS4B01G181600.1	Wheat	plastid	90.68	75.89
Zm00001d028895_P001	Maize	plastid	94.49	71.25
HORVU4Hr1G053660.1	Barley	plastid	90.68	69.93
CDY51306	Canola	plastid	77.12	65.7
VIT_07s0005g01530.t01	Wine grape	plastid	77.97	63.67
Bra033332.1-P	Field mustard	plastid	78.81	63.27
CDX89962	Canola	plastid	78.81	63.27
AT1G02560.1	Thale cress	plastid	79.24	62.75
KRH31786	Soybean	nucleus, plastid	80.08	62.38
GSMUA_Achr8P22320_001	Banana	plastid	79.24	62.33
Solyc01g100520.2.1	Tomato	plastid	77.54	61.2
KRH69210	Soybean	nucleus, plastid	80.08	60.77
Bra030504.1-P	Field mustard	plastid	76.69	60.54
CDY15250	Canola	plastid	78.39	60.46
CDY15433	Canola	plastid	76.69	59.54
KRH68271	Soybean	plastid	66.53	52.16
Zm00001d025891_P001	Maize	mitochondrion	44.07	40.0
Zm00001d002969_P001	Maize	mitochondrion	43.22	39.38
Zm00001d017330_P001	Maize	plastid	43.64	36.52
Zm00001d051203_P001	Maize	plastid	45.34	35.2
Zm00001d009339_P001	Maize	plastid	44.07	33.55
PGSC0003DMT400007157	Potato	endoplasmic reticulum, plasma membrane	77.54	32.45
GRMZM5G804708_P01	Maize	plastid	28.81	31.48
Zm00001d030149_P001	Maize	mitochondrion	38.98	28.93
Zm00001d040322_P002	Maize	plastid	30.51	24.91
Zm00001d045430_P002	Maize	plastid	30.51	22.22
Zm00001d029121_P005	Maize	plastid	30.08	20.94
Zm00001d039167_P001	Maize	plastid	28.39	17.27

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	UniProt:A0A1D6PC01	ProteinID:AQL07153.1	ProteinID:AQL07154.1	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381
ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF12	SUPFAM:SSF52096	UniParc:UPI00084377D2	EnsemblPlantsGene:Zm00001d047634
EnsemblPlants:Zm00001d047634_P002	EnsemblPlants:Zm00001d047634_T002	:	:	:	:

Description

virescent30 virescent30

Coordinates

chr9:+:137661761..137664763

Molecular Weight (calculated)

25611.0 Da

IEP (calculated)

6.146

GRAVY (calculated)

-0.071

Length

236 amino acids

Sequence
(BLAST)

001: MGFVRCHGVS DVACACGRDD LVVPRSPYFP VESAAGQERG PSPMVMERFQ SVVSQLFQHR IIRCGGPVED DMANIIVAQL LYLDAIDPNK DIIMYVNSPG
101: GSVTAGMAIF DTMKHIRPDV STVCIGLAAS MGAFLLSAGT KGKRYSLPNS RIMIHQPLGG AQGQETDLEI QANEMLHHKA NLNGYLAYHT GQPLDKINVD
201: TDRDYFMSAK EAKEYGLIDG VIMNPLKALQ PLPASS

Best Arabidopsis Sequence Match ( AT1G02560.1 )
(BLAST)

001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Arabidopsis Description

CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.