Factsheet for Bra030504.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15433	Canola	plastid	99.67	98.03
CDY51306	Canola	plastid	89.63	96.75
AT1G02560.1	Thale cress	plastid	91.64	91.95
Bra033332.1-P	Field mustard	plastid	89.97	91.5
KRH31786	Soybean	nucleus, plastid	79.26	78.22
VIT_07s0005g01530.t01	Wine grape	plastid	75.59	78.2
Zm00001d047634_P002	Maize	cytosol	60.54	76.69
KRH69210	Soybean	nucleus, plastid	78.26	75.24
Solyc01g100520.2.1	Tomato	plastid	74.58	74.58
GSMUA_Achr8P22320_001	Banana	plastid	72.24	72.0
TraesCS4D01G184400.1	Wheat	plastid	66.22	70.21
EER92371	Sorghum	plastid	66.22	69.96
TraesCS4B01G181600.1	Wheat	plastid	65.55	69.5
TraesCS4A01G121500.1	Wheat	plastid	65.55	69.5
Os03t0308100-01	Rice	plastid	64.88	68.79
HORVU4Hr1G053660.1	Barley	plastid	65.55	64.05
KRH68271	Soybean	plastid	63.88	63.46
Zm00001d028895_P001	Maize	plastid	66.22	63.26
PGSC0003DMT400007157	Potato	endoplasmic reticulum, plasma membrane	75.25	39.89
Bra013020.1-P	Field mustard	mitochondrion	31.1	39.57
Bra009331.1-P	Field mustard	mitochondrion	31.44	39.5
Bra004177.1-P	Field mustard	plastid	35.12	33.55
Bra025079.1-P	Field mustard	plastid	31.77	32.99
Bra016816.1-P	Field mustard	plastid	28.76	31.85
Bra019764.1-P	Field mustard	plastid	29.43	31.54
Bra031777.1-P	Field mustard	plastid	28.09	30.77
Bra040108.1-P	Field mustard	plastid	25.42	24.92
Bra012683.1-P	Field mustard	plastid	25.42	24.76
Bra030756.1-P	Field mustard	plastid	25.75	23.84
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.43	21.74
Bra014229.1-P	Field mustard	plastid	23.75	18.3

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	EnsemblPlantsGene:Bra030504	EnsemblPlants:Bra030504.1	EnsemblPlants:Bra030504.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	UniProt:M4ENY4	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF12	SUPFAM:SSF52096	UniParc:UPI0002545C8A
SEG:seg	:	:	:	:	:

Description

AT1G02560 (E=2e-146) CLPP5, NCLPP5, NCLPP1 | CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5); serine-type endopeptidase

Coordinates

chrA08:-:21534591..21536678

Molecular Weight (calculated)

32351.6 Da

IEP (calculated)

9.016

GRAVY (calculated)

-0.226

Length

299 amino acids

Sequence
(BLAST)

001: MGHACVSTSS ASSLRITAGF VSNGSSSFDS QKLSLPLPSR KTNKLVSERK NWKRSSSSSS STRKAVYSDG NLWTPAPPSP QGVWSIRDDL QVPSSPYFPA
101: YAQGPPPMVQ ERFQSIITQL FQYRIIRCGG AVDDDMANII VAQLLYLDAV DPTKDIVMYV NSPGGSVTAG MAIFDTMRHI RPDVSTVCVG LAASMGAFLL
201: SAGTKGKRYS LPNSRIMIHQ PLGGAQGGQT DIDIQANEML HHKANLNGYL AYQTGQSLEK INQDTDRDFF MSAKEAKDYG LIDAVIMNPL KALQPLAPA

Best Arabidopsis Sequence Match ( AT1G02560.1 )
(BLAST)

001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Arabidopsis Description

CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.