Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89962 | Canola | plastid | 95.3 | 96.6 |
| Bra033332.1-P | Field mustard | plastid | 94.97 | 96.26 |
| CDY15250 | Canola | plastid | 96.64 | 94.12 |
| CDY51306 | Canola | plastid | 86.91 | 93.5 |
| Bra030504.1-P | Field mustard | plastid | 91.95 | 91.64 |
| CDY15433 | Canola | plastid | 92.28 | 90.46 |
| VIT_07s0005g01530.t01 | Wine grape | plastid | 79.19 | 81.66 |
| KRH31786 | Soybean | nucleus, plastid | 82.55 | 81.19 |
| Zm00001d047634_P002 | Maize | cytosol | 62.75 | 79.24 |
| KRH69210 | Soybean | nucleus, plastid | 82.21 | 78.78 |
| Solyc01g100520.2.1 | Tomato | plastid | 77.18 | 76.92 |
| GSMUA_Achr8P22320_001 | Banana | plastid | 75.5 | 75.0 |
| EER92371 | Sorghum | plastid | 69.46 | 73.14 |
| TraesCS4D01G184400.1 | Wheat | plastid | 69.13 | 73.05 |
| TraesCS4B01G181600.1 | Wheat | plastid | 68.46 | 72.34 |
| TraesCS4A01G121500.1 | Wheat | plastid | 68.46 | 72.34 |
| Os03t0308100-01 | Rice | plastid | 68.12 | 71.99 |
| HORVU4Hr1G053660.1 | Barley | plastid | 68.46 | 66.67 |
| Zm00001d028895_P001 | Maize | plastid | 69.13 | 65.81 |
| KRH68271 | Soybean | plastid | 66.11 | 65.45 |
| PGSC0003DMT400007157 | Potato | endoplasmic reticulum, plasma membrane | 77.18 | 40.78 |
| AT5G23140.1 | Thale cress | mitochondrion, plastid | 32.89 | 40.66 |
| ATCG00670.1 | Thale cress | cytosol | 23.15 | 35.2 |
| AT5G45390.1 | Thale cress | plastid | 33.22 | 33.9 |
| AT1G66670.1 | Thale cress | plastid | 34.56 | 33.33 |
| AT1G11750.2 | Thale cress | plastid | 30.87 | 31.83 |
| AT1G12410.1 | Thale cress | plastid | 29.53 | 31.54 |
| AT4G17040.1 | Thale cress | plastid | 26.85 | 26.23 |
| AT1G09130.3 | Thale cress | plastid | 26.17 | 21.08 |
| AT1G49970.1 | Thale cress | plastid | 25.17 | 19.38 |
Protein Annotations
| MapMan:19.4.2.9.1 | PDB:1R92 | Gene3D:3.90.226.10 | EntrezGene:839433 | UniProt:A0A178WMF0 | ProteinID:AAG10637.1 |
| EMBL:AB022326 | ProteinID:AEE27444.1 | EMBL:AJ012278 | ArrayExpress:AT1G02560 | EnsemblPlantsGene:AT1G02560 | RefSeq:AT1G02560 |
| TAIR:AT1G02560 | RefSeq:AT1G02560-TAIR-G | EnsemblPlants:AT1G02560.1 | TAIR:AT1G02560.1 | EMBL:AY084394 | EMBL:BT024859 |
| Symbol:CLPP5 | InterPro:ClpP | InterPro:ClpP/TepA | InterPro:ClpP/crotonase-like_dom_sf | InterPro:ClpP_His_AS | InterPro:ClpP_Ser_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008236 |
| GO:GO:0009507 | GO:GO:0009532 | GO:GO:0009534 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 |
| GO:GO:0009840 | GO:GO:0009941 | GO:GO:0016787 | GO:GO:0019538 | HAMAP:MF_00444 | RefSeq:NP_563657.1 |
| ProteinID:OAP19426.1 | PFAM:PF00574 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00127 | ScanProsite:PS00381 | ScanProsite:PS00382 |
| PANTHER:PTHR10381 | PANTHER:PTHR10381:SF12 | UniProt:Q9S834 | MEROPS:S14.A01 | SUPFAM:SSF52096 | UniParc:UPI000005EAEE |
Description
CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
Coordinates
chr1:+:537740..540127
Molecular Weight (calculated)
32357.7 Da
IEP (calculated)
8.436
GRAVY (calculated)
-0.198
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.