Factsheet for GSMUA_Achr8P22320_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047634_P002	Maize	cytosol	62.33	79.24
CDY51306	Canola	plastid	70.33	76.17
Bra033332.1-P	Field mustard	plastid	74.0	75.51
CDX89962	Canola	plastid	74.0	75.51
AT1G02560.1	Thale cress	plastid	75.0	75.5
VIT_07s0005g01530.t01	Wine grape	plastid	72.33	75.09
CDY15250	Canola	plastid	74.67	73.2
Bra030504.1-P	Field mustard	plastid	72.0	72.24
KRH31786	Soybean	nucleus, plastid	72.67	71.95
Solyc01g100520.2.1	Tomato	plastid	71.67	71.91
KRH69210	Soybean	nucleus, plastid	74.33	71.7
TraesCS4D01G184400.1	Wheat	plastid	67.33	71.63
TraesCS4A01G121500.1	Wheat	plastid	67.33	71.63
CDY15433	Canola	plastid	72.33	71.38
EER92371	Sorghum	plastid	67.33	71.38
TraesCS4B01G181600.1	Wheat	plastid	67.0	71.28
Os03t0308100-01	Rice	plastid	67.0	71.28
HORVU4Hr1G053660.1	Barley	plastid	67.33	66.01
Zm00001d028895_P001	Maize	plastid	67.0	64.22
KRH68271	Soybean	plastid	60.67	60.47
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	13.0	57.35
GSMUA_Achr6P01290_001	Banana	extracellular, peroxisome, plastid	30.0	40.91
PGSC0003DMT400007157	Potato	endoplasmic reticulum, plasma membrane	74.67	39.72
GSMUA_AchrUn_...	Banana	cytosol	26.67	39.41
GSMUA_Achr5P10890_001	Banana	plastid	34.67	38.95
GSMUA_Achr8P05270_001	Banana	plastid	30.67	34.59
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	14.0	32.31
GSMUA_Achr4P13550_001	Banana	plastid	33.67	27.37
GSMUA_Achr8P14970_001	Banana	mitochondrion	22.0	26.94
GSMUA_Achr1P08260_001	Banana	plastid	25.67	26.83
GSMUA_Achr9P24480_001	Banana	plastid	26.67	24.02
GSMUA_Achr3P08150_001	Banana	plastid	23.33	20.77
GSMUA_Achr2P08390_001	Banana	plastid	22.33	16.83

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS
InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008236	GO:GO:0009507	GO:GO:0009532	GO:GO:0009534	GO:GO:0009536	GO:GO:0009570
GO:GO:0009579	GO:GO:0009840	GO:GO:0009941	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G22320_001
EnsemblPlants:GSMUA_Achr8P22320_001	EnsemblPlants:GSMUA_Achr8T22320_001	UniProt:M0TSN5	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF12	SUPFAM:SSF52096	UniParc:UPI0002967843
SEG:seg	:	:	:	:	:

Description

ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G22320_001]

Coordinates

chr8:+:26940036..26945048

Molecular Weight (calculated)

32483.9 Da

IEP (calculated)

8.984

GRAVY (calculated)

-0.208

Length

300 amino acids

Sequence
(BLAST)

001: MVFAAATTTT TAPSSAAASP LQSLARGTLR LSFGSPLLHP QSSSASPKKG RRLVCSWSSP KAVYSANSWA PERSQRKGIW SIRDDLVMPS SPYFPIEAQG
101: GQGPPPMVQE RFQSVISQLF QHRIIRFGGP VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AVFDTMRHIR PDVSTVCVGL AASMGAFILS
201: SGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSFERI NQDTDRDYFM SAKEAKEYGL IDGVIMNPLK ALQPLPATQE

Best Arabidopsis Sequence Match ( AT1G02560.1 )
(BLAST)

001: MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ
101: GQGPPPMVQE RFQSIISQLF QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR PDVSTVCVGL AASMGAFLLS
201: AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Arabidopsis Description

CLPP5ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WMF0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.