Factsheet for GSMUA_Achr8P05270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29491	Soybean	plastid	74.06	72.16
VIT_03s0063g02300.t01	Wine grape	plastid	71.8	71.0
KRH24490	Soybean	plastid	72.56	70.7
HORVU3Hr1G083440.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.3	70.13
CDY31211	Canola	plastid	69.92	68.89
CDY34832	Canola	plastid	70.68	68.86
Bra031777.1-P	Field mustard	plastid	70.3	68.5
CDY21009	Canola	plastid	69.17	68.15
PGSC0003DMT400084282	Potato	plastid	70.3	68.0
Bra016816.1-P	Field mustard	plastid	68.8	67.78
Solyc10g051310.1.1	Tomato	plastid	68.8	66.55
AT1G11750.2	Thale cress	plastid	70.3	64.71
Os03t0411500-01	Rice	plastid	59.02	60.62
TraesCS4D01G157200.1	Wheat	plastid	57.14	57.14
TraesCS4B01G165100.1	Wheat	plastid	56.02	56.02
TraesCS4A01G149900.1	Wheat	plastid	57.89	55.6
EES07709	Sorghum	plastid	57.14	55.07
HORVU4Hr1G038160.2	Barley	plastid	56.39	53.0
CDY34630	Canola	plastid	34.21	51.12
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	10.53	41.18
GSMUA_Achr8P22320_001	Banana	plastid	34.59	30.67
GSMUA_AchrUn_...	Banana	cytosol	23.31	30.54
GSMUA_Achr6P01290_001	Banana	extracellular, peroxisome, plastid	25.19	30.45
GSMUA_Achr5P10890_001	Banana	plastid	29.7	29.59
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	14.29	29.23
GSMUA_Achr8P14970_001	Banana	mitochondrion	23.68	25.71
GSMUA_Achr1P08260_001	Banana	plastid	26.69	24.74
GSMUA_Achr3P08150_001	Banana	plastid	28.95	22.85
GSMUA_Achr9P24480_001	Banana	plastid	27.07	21.62
GSMUA_Achr4P13550_001	Banana	plastid	28.57	20.6
GSMUA_Achr2P08390_001	Banana	plastid	23.31	15.58

Protein Annotations

MapMan:19.4.2.9.1	Gene3D:3.90.226.10	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009532
GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009658	GO:GO:0009840
GO:GO:0009941	GO:GO:0009987	GO:GO:0015979	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G05270_001	EnsemblPlants:GSMUA_Achr8P05270_001	EnsemblPlants:GSMUA_Achr8T05270_001	UniProt:M0TMT0	HAMAP:MF_00444	PFAM:PF00574
PRINTS:PR00127	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF8	SUPFAM:SSF52096	UniParc:UPI000295B061
SEG:seg	:	:	:	:	:

Description

ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G05270_001]

Coordinates

chr8:+:3430412..3436887

Molecular Weight (calculated)

28944.9 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.089

Length

266 amino acids

Sequence
(BLAST)

001: MASVPISTPL GFAAAASSSA RSRSIKPAPP RNMFHPYASL DVPGKNNQVH SLSLKLSELQ HRSFRHDAVI EAKQGNPPIM PAVMTPGGPL DLSSILFRNR
101: IIFIGQPVNS QVAQRVISQL VTLATVDEDA DILIYVNCPG GSTYSVLAIY DCMSWIKPKV GTVCFGVAAS QGALLLAGGE KGMRYAMPNA RIMIHQPQSG
201: CGGHVEDVRR QVNEAVQSRH KIDKMYAAFT GQPLEKIQQY TDRDRFFSAS EALEFGLIDG ILETEY

Best Arabidopsis Sequence Match ( AT1G11750.1 )
(BLAST)

001: MAGLAISPPL GLSFSSRTRN PKPTSFLSHN QRNPIRRIVS ALQSPYGDSL KAGLSSNVSG SPIKIDNKAP RFGVIEAKKG NPPVMPSVMT PGGPLDLSSV
101: LFRNRIIFIG QPINAQVAQR VISQLVTLAS IDDKSDILMY LNCPGGSTYS VLAIYDCMSW IKPKVGTVAF GVAASQGALL LAGGEKGMRY AMPNTRVMIH
201: QPQTGCGGHV EDVRRQVNEA IEARQKIDRM YAAFTGQPLE KVQQYTERDR FLSASEALEF GLIDGLLETE Y

Arabidopsis Description

CLPP6ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F4IAG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.