Factsheet for GSMUA_Achr5P10890_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	54.68	71.92
Zm00001d025891_P001	Maize	mitochondrion	60.67	62.31
KRH29139	Soybean	mitochondrion, nucleus	55.43	62.18
CDX69964	Canola	plastid	34.83	62.0
Zm00001d002969_P001	Maize	mitochondrion	59.93	61.78
KRH24178	Soybean	mitochondrion	54.31	61.44
VIT_01s0011g02100.t01	Wine grape	mitochondrion	55.43	61.41
Solyc04g009310.2.1	Tomato	plastid	53.56	60.59
PGSC0003DMT400082481	Potato	mitochondrion	52.81	59.75
CDY61915	Canola	mitochondrion	52.06	58.9
CDY21523	Canola	mitochondrion	52.43	58.82
Bra009331.1-P	Field mustard	mitochondrion	51.69	57.98
Bra013020.1-P	Field mustard	mitochondrion	50.94	57.87
CDY02210	Canola	mitochondrion	50.56	57.45
AT5G23140.1	Thale cress	mitochondrion, plastid	50.94	56.43
PGSC0003DMT400027435	Potato	mitochondrion	50.19	56.3
TraesCS2B01G393400.1	Wheat	plastid	62.17	56.08
Zm00001d017330_P001	Maize	plastid	58.8	55.67
KXG26753	Sorghum	plastid	61.8	55.0
TraesCS2D01G372600.1	Wheat	plastid	61.8	55.0
TraesCS6B01G262000.1	Wheat	plastid	60.3	53.67
TraesCS6A01G220500.1	Wheat	plastid	60.3	53.67
Os04t0525600-01	Rice	mitochondrion	61.8	53.4
TraesCS6D01G214700.1	Wheat	plastid	59.18	53.38
Os02t0634500-01	Rice	plastid	59.55	53.36
Zm00001d051203_P001	Maize	plastid	59.93	52.63
OQU85365	Sorghum	plastid	59.93	51.78
HORVU2Hr1G090470.1	Barley	plastid	61.8	48.82
GSMUA_Achr4P06560_001	Banana	cytosol, plastid, vacuole	12.36	48.53
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	19.48	40.0
GSMUA_Achr6P01290_001	Banana	extracellular, peroxisome, plastid	31.09	37.73
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	59.93	36.95
GSMUA_Achr8P22320_001	Banana	plastid	38.95	34.67
GSMUA_Achr8P05270_001	Banana	plastid	29.59	29.7
GSMUA_Achr8P14970_001	Banana	mitochondrion	26.59	28.98
GSMUA_Achr1P08260_001	Banana	plastid	28.46	26.48
GSMUA_Achr9P24480_001	Banana	plastid	31.46	25.23
GSMUA_Achr4P13550_001	Banana	plastid	33.33	24.12
GSMUA_Achr3P08150_001	Banana	plastid	26.59	21.07
GSMUA_Achr2P08390_001	Banana	plastid	25.84	17.34

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS
InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G10890_001
EnsemblPlants:GSMUA_Achr5P10890_001	EnsemblPlants:GSMUA_Achr5T10890_001	UniProt:M0SXG8	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF40	SUPFAM:SSF52096	UniParc:UPI000296046E
SEG:seg	:	:	:	:	:

Description

ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G10890_001]

Coordinates

chr5:+:7866421..7867224

Molecular Weight (calculated)

29026.3 Da

IEP (calculated)

8.650

GRAVY (calculated)

-0.090

Length

267 amino acids

Sequence
(BLAST)

001: MDPKACVLDT PRCNPPLRRC CPTRHRPLWC PRLALSGTLR HSGRRAVVSS AGATRAYSVP LVIEQTKHGE MAYDVFSRLL KERIVCVNGA ISDEIAAVVV
101: AQLLFLESQN PSKTINLYVN SPGGAVTAGL AIYDTMQYIS SPVSTLCLGQ AASMGSLLLA AGSTGERRAL PHSRIMIHQP SGGASGQATD IAIQAKEILK
201: VRDRLNAIYA RHTGQPIERI EQCMERDTFM SPEEAKEFGL LDEVIVHRPL ACAPPAKHQE LLLHGSR

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.