Factsheet for Os04t0525600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 7
nucleus 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
plasma membrane: 28056797

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025891_P001	Maize	mitochondrion	78.64	93.46
Zm00001d002969_P001	Maize	mitochondrion	77.99	93.05
KXG26753	Sorghum	plastid	84.14	86.67
TraesCS2B01G393400.1	Wheat	plastid	82.2	85.81
TraesCS2D01G372600.1	Wheat	plastid	81.55	84.0
GSMUA_AchrUn_...	Banana	cytosol	49.51	75.37
HORVU2Hr1G090470.1	Barley	plastid	81.88	74.85
Os02t0634500-01	Rice	plastid	69.26	71.81
CDX69964	Canola	plastid	33.66	69.33
CDY61915	Canola	mitochondrion	51.46	67.37
KRH29139	Soybean	mitochondrion, nucleus	51.13	66.39
KRH24178	Soybean	mitochondrion	50.16	65.68
AT5G23140.1	Thale cress	mitochondrion, plastid	51.13	65.56
VIT_01s0011g02100.t01	Wine grape	mitochondrion	51.13	65.56
Bra013020.1-P	Field mustard	mitochondrion	49.84	65.53
Bra009331.1-P	Field mustard	mitochondrion	50.16	65.13
CDY02210	Canola	mitochondrion	49.51	65.11
CDY21523	Canola	mitochondrion	49.84	64.71
PGSC0003DMT400082481	Potato	mitochondrion	48.87	63.98
Solyc04g009310.2.1	Tomato	plastid	48.87	63.98
PGSC0003DMT400027435	Potato	mitochondrion	47.9	62.18
GSMUA_Achr5P10890_001	Banana	plastid	53.4	61.8
Os03t0308100-01	Rice	plastid	34.95	38.3
Os03t0411500-01	Rice	plastid	25.57	30.5
Os10t0580800-01	Rice	plastid	28.8	30.38
Os01t0507900-01	Rice	plastid	29.77	29.3
CAA33972	Rice	cytosol	19.74	28.24
Os01t0271400-00	Rice	nucleus, plasma membrane, plastid	26.54	27.52
Os06t0136800-01	Rice	plastid	25.57	26.6
Os03t0344900-00	Rice	plastid	27.83	25.22
Os05t0592100-01	Rice	plastid	21.36	17.1

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	EntrezGene:4336449	EMBL:AK121934	ProteinID:BAF15272.1	ProteinID:BAS90161.1
InterPro:ClpP	InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	HAMAP:MF_00444	EnsemblPlantsGene:Os04g0525600	EnsemblPlants:Os04t0525600-01
PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF40
UniProt:Q0JBL5	MEROPS:S14.A02	SUPFAM:SSF52096	UniParc:UPI0000DD91AB	RefSeq:XP_015635776.1	SEG:seg

Description

Clp protease 7, CLP PROTEASE 7ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp). (Os04t0525600-01);Similar to ATP-dependent Clp protease proteolytic subunit. (Os04t0525600-02)

Coordinates

chr4:+:26284657..26285800

Molecular Weight (calculated)

33009.6 Da

IEP (calculated)

7.303

GRAVY (calculated)

-0.229

Length

309 amino acids

Sequence
(BLAST)

001: MLPVAPTRQP LTASSWPRLA AAGPTPPRPN LPLNPAPPPP PPPPNPSPAA MLRRLAAAAP RAFFSSSTPH APPPPAGYTQ RREYGLVPMV IEHTSRGERA
101: YDIFSRLLKE RIVCIHGPIT DDTASLVVAQ LLFLESENPA KPVHLYINSP GGVVTAGLAI YDTMQYIRSP VTTLCIGQAA SMASLLLAAG ARGERRALPN
201: ARVMIHQPSG GASGQASDIA IHAKEILKVR DRLNKIYAKH TSQAIDRIEQ CMERDMFMDP EEAHDWGLID EVIEHRPVSL VSDAVGSDLP NLGGGGDGAN
301: KATDEPSPA

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.