Factsheet for Bra009331.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69964	Canola	plastid	61.76	98.0
Bra013020.1-P	Field mustard	mitochondrion	86.97	88.09
PGSC0003DMT400027435	Potato	mitochondrion	78.57	78.57
VIT_01s0011g02100.t01	Wine grape	mitochondrion	79.41	78.42
PGSC0003DMT400082481	Potato	mitochondrion	77.31	77.97
Solyc04g009310.2.1	Tomato	plastid	76.05	76.69
KRH29139	Soybean	mitochondrion, nucleus	76.05	76.05
KRH24178	Soybean	mitochondrion	74.79	75.42
GSMUA_AchrUn_...	Banana	cytosol	55.04	64.53
Zm00001d002969_P001	Maize	mitochondrion	66.39	61.0
Zm00001d025891_P001	Maize	mitochondrion	65.97	60.38
TraesCS2B01G393400.1	Wheat	plastid	65.55	52.7
KXG26753	Sorghum	plastid	66.39	52.67
TraesCS2D01G372600.1	Wheat	plastid	65.55	52.0
GSMUA_Achr5P10890_001	Banana	plastid	57.98	51.69
Zm00001d017330_P001	Maize	plastid	60.5	51.06
Os04t0525600-01	Rice	mitochondrion	65.13	50.16
TraesCS6A01G220500.1	Wheat	plastid	61.34	48.67
Zm00001d051203_P001	Maize	plastid	61.76	48.36
TraesCS6B01G262000.1	Wheat	plastid	60.92	48.33
Os02t0634500-01	Rice	plastid	60.5	48.32
TraesCS6D01G214700.1	Wheat	plastid	59.24	47.64
OQU85365	Sorghum	plastid	61.76	47.57
HORVU2Hr1G090470.1	Barley	plastid	65.13	45.86
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	60.92	33.49
Bra033332.1-P	Field mustard	plastid	39.5	31.97
Bra030504.1-P	Field mustard	plastid	39.5	31.44
Bra025079.1-P	Field mustard	plastid	34.45	28.47
Bra019764.1-P	Field mustard	plastid	32.77	27.96
Bra040108.1-P	Field mustard	plastid	35.71	27.87
Bra016816.1-P	Field mustard	plastid	31.51	27.78
Bra012683.1-P	Field mustard	plastid	35.71	27.69
Bra031777.1-P	Field mustard	plastid	31.51	27.47
Bra004177.1-P	Field mustard	plastid	34.45	26.2
Bra030756.1-P	Field mustard	plastid	29.83	21.98
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.35	19.69
Bra014229.1-P	Field mustard	plastid	28.15	17.27

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	EnsemblPlantsGene:Bra009331	EnsemblPlants:Bra009331.1	EnsemblPlants:Bra009331.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0016787	GO:GO:0019538	UniProt:M4CYN4	HAMAP:MF_00444	PFAM:PF00574	PRINTS:PR00127
ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF40	SUPFAM:SSF52096	UniParc:UPI0002543D4E
SEG:seg	:	:	:	:	:

Description

AT5G23140 (E=9e-109) CLPP2, NCLPP7 | NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase

Coordinates

chrA10:-:16212595..16213786

Molecular Weight (calculated)

26087.5 Da

IEP (calculated)

8.226

GRAVY (calculated)

-0.167

Length

238 amino acids

Sequence
(BLAST)

001: MRGLISGAKR LWTTPPPTAI ATAIARRSYS VIPMVIETSS RGERAYDIFS RLLKERIICI NGPINDDTSH VVVAQLLYLE SENPSKPIHM YLNSPGGHVT
101: AGLAIYDTMQ YIRSPISTIC LGQAASMASL LLAAGAKGQR RALPNASVMI HQPSGGYSGQ AKDMTIHTKQ IVRVWDALNQ LYVKHTGQSI DVIEKNMDRD
201: HFMTPEEAKA FGIIDEVIDE RPLELVKDAV GGESKDKS

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.