Factsheet for Bra014229.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59367	Canola	plastid	100.0	100.0
AT1G49970.1	Thale cress	plastid	94.59	94.83
KRH35674	Soybean	plastid	68.81	71.77
KRG91103	Soybean	plastid	68.3	71.24
VIT_03s0091g00700.t01	Wine grape	plastid	70.1	70.1
PGSC0003DMT400065220	Potato	plastid	66.49	65.65
Solyc10g049710.1.1	Tomato	plastid	64.43	65.1
GSMUA_Achr2P08390_001	Banana	plastid	66.75	65.08
EES20050	Sorghum	plastid	53.35	53.35
Os05t0592100-01	Rice	plastid	52.84	53.11
Zm00001d039167_P001	Maize	plastid	52.32	52.32
TraesCS1A01G437500.2	Wheat	plastid	51.8	51.94
TraesCS1B01G472100.1	Wheat	plastid	51.29	51.69
TraesCS1D01G445300.1	Wheat	plastid	51.29	51.16
HORVU1Hr1G094480.1	Barley	plastid	51.8	47.41
Bra030756.1-P	Field mustard	plastid	28.61	34.37
Bra040108.1-P	Field mustard	plastid	25.26	32.13
Bra012683.1-P	Field mustard	plastid	25.26	31.92
Bra013020.1-P	Field mustard	mitochondrion	17.53	28.94
Bra009331.1-P	Field mustard	mitochondrion	17.27	28.15
Bra019764.1-P	Field mustard	plastid	19.07	26.52
Bra033332.1-P	Field mustard	plastid	19.07	25.17
Bra030504.1-P	Field mustard	plastid	18.3	23.75
Bra025079.1-P	Field mustard	plastid	17.01	22.92
Bra016816.1-P	Field mustard	plastid	15.72	22.59
Bra004177.1-P	Field mustard	plastid	18.04	22.36
Bra031777.1-P	Field mustard	plastid	15.72	22.34
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.81	18.67

Protein Annotations

MapMan:19.4.2.9.2	Gene3D:3.90.226.10	EnsemblPlantsGene:Bra014229	EnsemblPlants:Bra014229.1	EnsemblPlants:Bra014229.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004252	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006364	GO:GO:0006396	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009532	GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579
GO:GO:0009658	GO:GO:0009840	GO:GO:0009941	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0019538	UniProt:M4DCL3	PFAM:PF00574	PRINTS:PR00127	PANTHER:PTHR10381	PANTHER:PTHR10381:SF18
SUPFAM:SSF52096	UniParc:UPI0002546180	SEG:seg	:	:	:

Description

AT1G49970 (E=2e-202) CLPR1, NCLPP5, SVR2 | CLPR1; serine-type endopeptidase

Coordinates

chrA08:+:2359680..2362346

Molecular Weight (calculated)

42639.7 Da

IEP (calculated)

8.992

GRAVY (calculated)

-0.489

Length

388 amino acids

Sequence
(BLAST)

001: MATSMVSPLT SQLNHESVCS KFVLPKSPFM SGSKLFSSNM PCSSVPRRTR RSNCFASAKD MSFDHIPKQF RGDNLKDGVT QNFKNVPQYF YGLNPAQMDM
101: FMTEDSPVRR QAEKVTEESI SSRSNYLDNG GTWSMSGMNA ADPKRYSMSV QMYRGGGGGG GSARPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPSK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKTKEQINED IKRPKYLQAQ AAIDYGIADK IANSQDSSFE KRDYDGSLAQ RAMGRPGGGN PTSPAGLR

Best Arabidopsis Sequence Match ( AT1G49970.1 )
(BLAST)

001: MATALVSPLT SQLNHEAVCS KFVLPKSPFM SGSKLFSSNM PCSTVPRRTR RSHCFASAKD MSFDHIPKQF RGDNLKDGVM QNFKNVPQYF YGLNSAQMDM
101: FMTEDSPVRR QAEKVTEESI SSRNNYLNNG GIWSMSGMNA ADARRYSMSV QMYRGGGGGG GSERPRTAPP DLPSLLLDAR ICYLGMPIVP AVTELLVAQF
201: MWLDYDNPTK PIYLYINSPG TQNEKMETVG SETEAYAIAD TISYCKSDVY TINCGMAFGQ AAMLLSLGKK GYRAVQPHSS TKLYLPKVNR SSGAAIDMWI
301: KAKELDANTE YYIELLAKGT GKSKEQINED IKRPKYLQAQ AAIDYGIADK IADSQDSSFE KRDYDGTLAQ RAMRPGGGSP AAPAGLR

Arabidopsis Description

CLPR1ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.