Factsheet for Bra013020.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02210	Canola	mitochondrion	99.57	99.57
AT5G23140.1	Thale cress	mitochondrion, plastid	91.06	88.8
Bra009331.1-P	Field mustard	mitochondrion	88.09	86.97
PGSC0003DMT400082481	Potato	mitochondrion	79.15	78.81
PGSC0003DMT400027435	Potato	mitochondrion	79.57	78.57
KRH24178	Soybean	mitochondrion	77.87	77.54
Solyc04g009310.2.1	Tomato	plastid	77.87	77.54
KRH29139	Soybean	mitochondrion, nucleus	77.87	76.89
VIT_01s0011g02100.t01	Wine grape	mitochondrion	77.87	75.93
GSMUA_AchrUn_...	Banana	cytosol	55.32	64.04
Zm00001d002969_P001	Maize	mitochondrion	66.38	60.23
Zm00001d025891_P001	Maize	mitochondrion	65.96	59.62
TraesCS2B01G393400.1	Wheat	plastid	66.38	52.7
TraesCS2D01G372600.1	Wheat	plastid	66.81	52.33
KXG26753	Sorghum	plastid	66.38	52.0
GSMUA_Achr5P10890_001	Banana	plastid	57.87	50.94
Zm00001d017330_P001	Maize	plastid	60.43	50.35
Os04t0525600-01	Rice	mitochondrion	65.53	49.84
Zm00001d051203_P001	Maize	plastid	61.7	47.7
TraesCS6A01G220500.1	Wheat	plastid	60.43	47.33
TraesCS6B01G262000.1	Wheat	plastid	60.0	47.0
Os02t0634500-01	Rice	plastid	59.15	46.64
OQU85365	Sorghum	plastid	61.28	46.6
TraesCS6D01G214700.1	Wheat	plastid	58.3	46.28
HORVU2Hr1G090470.1	Barley	plastid	65.96	45.86
HORVU6Hr1G059510.8	Barley	cytosol, peroxisome	60.0	32.56
Bra033332.1-P	Field mustard	plastid	39.15	31.29
Bra030504.1-P	Field mustard	plastid	39.57	31.1
Bra025079.1-P	Field mustard	plastid	33.62	27.43
Bra016816.1-P	Field mustard	plastid	31.06	27.04
Bra040108.1-P	Field mustard	plastid	34.89	26.89
Bra012683.1-P	Field mustard	plastid	34.89	26.71
Bra031777.1-P	Field mustard	plastid	30.64	26.37
Bra004177.1-P	Field mustard	plastid	34.47	25.88
Bra019764.1-P	Field mustard	plastid	30.21	25.45
Bra030756.1-P	Field mustard	plastid	31.06	22.6
Bra026972.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.79	17.9
Bra014229.1-P	Field mustard	plastid	28.94	17.53

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	EnsemblPlantsGene:Bra013020	EnsemblPlants:Bra013020.1	EnsemblPlants:Bra013020.1-P	InterPro:ClpP
InterPro:ClpP/TepA	InterPro:ClpP/crotonase-like_dom_sf	InterPro:ClpP_His_AS	InterPro:ClpP_Ser_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004252	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0008270	GO:GO:0009532	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009840
GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0050897	UniProt:M4D960	HAMAP:MF_00444
PFAM:PF00574	PRINTS:PR00127	ScanProsite:PS00381	ScanProsite:PS00382	PANTHER:PTHR10381	PANTHER:PTHR10381:SF40
SUPFAM:SSF52096	UniParc:UPI000254048B	SEG:seg	:	:	:

Description

AT5G23140 (E=3e-106) CLPP2, NCLPP7 | NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase

Coordinates

chrA03:-:20966571..20967349

Molecular Weight (calculated)

25560.9 Da

IEP (calculated)

7.213

GRAVY (calculated)

-0.118

Length

235 amino acids

Sequence
(BLAST)

001: MMMMMRGLLS TATSSAGGGR RSYSLIPMVI EHSSRGERAY DIFSRLLKER IICINGPIND DTSHVVVAQL LFLESENPSK PIHMYLNSPG GHVTAGLAIY
101: DTMQYIRSPI STICLGQAAS MASLLLAAGA KGQRRSLPNA TVMIHQPSGG YSGQAKDLTI HTKQIVRVWD ALNGLYSKHT GQPIDVVAEN MDRDNFMTPQ
201: EAKAFGIIDE VIDERPLELV KDAVVGGESK DKSLS

Best Arabidopsis Sequence Match ( AT5G23140.1 )
(BLAST)

001: MMRGLVSGAK MLSSTPSSMA TSIATGRRSY SLIPMVIEHS SRGERAYDIF SRLLKERIIC INGPINDDTS HVVVAQLLYL ESENPSKPIH MYLNSPGGHV
101: TAGLAIYDTM QYIRSPISTI CLGQAASMAS LLLAAGAKGQ RRSLPNATVM IHQPSGGYSG QAKDITIHTK QIVRVWDALN ELYVKHTGQP LDVVANNMDR
201: DHFMTPEEAK AFGIIDEVID ERPLELVKDA VGNESKDKSS S

Arabidopsis Description

CLPP2ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FN42]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.